RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 GLTPD2A6NH11 291 aa24.25■■□□□ 1.47
SHROOM3-209ENST00000490690 YDJCA8MPS7 323 aa24.25■■□□□ 1.47
SHROOM3-209ENST00000490690 VIL1P09327 827 aaKnown RBP24.25■■□□□ 1.47
SHROOM3-209ENST00000490690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.25■■□□□ 1.47
SHROOM3-209ENST00000490690 SMARCA5O60264 1052 aaPredicted RBP24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 RAD17O75943 681 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 GTF2IP78347 998 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 FBXW7Q969H0 707 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 ECHDC1Q9NTX5 307 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 TIAM2Q8IVF5 1701 aa24.24■■□□□ 1.47
SHROOM3-209ENST00000490690 RSBN1LQ6PCB5 846 aaPredicted RBP24.23■■□□□ 1.47
SHROOM3-209ENST00000490690 DPF2Q92785 391 aa24.23■■□□□ 1.47
SHROOM3-209ENST00000490690 COL4A5P29400 1685 aa24.23■■□□□ 1.47
SHROOM3-209ENST00000490690 SALL1Q9NSC2 1324 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 IQCA1LA6NCM1 817 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 PSMD14O00487 310 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 MX1P20591 662 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 LMOD1P29536 600 aaPredicted RBP24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 SPTY2D1Q68D10 685 aaPredicted RBP24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 TMED8Q6PL24 325 aaPredicted RBP24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 SPATA5Q8NB90 893 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 LNPKQ9C0E8 428 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 BCL11AQ9H165 835 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 TLR7Q9NYK1 1049 aaKnown RBP24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 GJA3Q9Y6H8 435 aa24.22■■□□□ 1.47
SHROOM3-209ENST00000490690 CCDC88AQ3V6T2 1871 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 MAST3O60307 1309 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 ZNF541Q9H0D2 1346 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 ATP5JP18859 108 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 RASGRF1Q13972 1273 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 TTF1Q15361 905 aaPredicted RBP24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 DACT2Q5SW24 774 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 OGFOD1Q8N543 542 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 L3MBTL3Q96JM7 780 aaPredicted RBP24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 HDAC9Q9UKV0 1011 aa24.21■■□□□ 1.47
SHROOM3-209ENST00000490690 AOX1Q06278 1338 aa24.2■■□□□ 1.46
SHROOM3-209ENST00000490690 GLRX3O76003 335 aaKnown RBP24.2■■□□□ 1.46
SHROOM3-209ENST00000490690 CHAF1AQ13111 956 aaPredicted RBP24.2■■□□□ 1.46
SHROOM3-209ENST00000490690 IQSEC3Q9UPP2 1182 aaPredicted RBP24.19■■□□□ 1.46
SHROOM3-209ENST00000490690 SLF2Q8IX21 1173 aa24.18■■□□□ 1.46
SHROOM3-209ENST00000490690 HMG20BQ9P0W2 317 aa24.18■■□□□ 1.46
SHROOM3-209ENST00000490690 H7C1D1 291 aa24.17■■□□□ 1.46
SHROOM3-209ENST00000490690 DDNO94850 711 aaPredicted RBP24.17■■□□□ 1.46
SHROOM3-209ENST00000490690 MCAMP43121 646 aa24.17■■□□□ 1.46
SHROOM3-209ENST00000490690 STAP2Q9UGK3 403 aa24.17■■□□□ 1.46
SHROOM3-209ENST00000490690 YY1P25490 414 aa24.16■■□□□ 1.46
SHROOM3-209ENST00000490690 LRRFIP1Q32MZ4 808 aaKnown RBP24.16■■□□□ 1.46
SHROOM3-209ENST00000490690 KCNQ5Q9NR82 932 aa24.16■■□□□ 1.46
SHROOM3-209ENST00000490690 LDHBP07195 334 aaKnown RBP24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 USP17L8P0C7I0 530 aa24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 GMPSP49915 693 aaPredicted RBP24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 HAUS7Q99871 368 aa24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 OSBPL3Q9H4L5 887 aa24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 HACL1Q9UJ83 578 aa24.15■■□□□ 1.46
SHROOM3-209ENST00000490690 SALL3Q9BXA9 1300 aa24.14■■□□□ 1.46
SHROOM3-209ENST00000490690 PDE1AP54750 535 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 HDLBPQ00341 1268 aaKnown RBP24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 ERICH6Q7L0X2 663 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 GMLQ99445 158 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 MRIQ9BWK5 157 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 GPRC5DQ9NZD1 345 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 PSME4Q14997 1843 aa24.14■■□□□ 1.45
SHROOM3-209ENST00000490690 GSTO1P78417 241 aa24.13■■□□□ 1.45
SHROOM3-209ENST00000490690 TICAM2Q86XR7 235 aa24.13■■□□□ 1.45
SHROOM3-209ENST00000490690 LRP2BPQ9P2M1 347 aa24.13■■□□□ 1.45
SHROOM3-209ENST00000490690 ABCF2Q9UG63 623 aa24.13■■□□□ 1.45
SHROOM3-209ENST00000490690 VEGFAP15692 232 aaPredicted RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 MAP3K12Q12852 859 aa24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 PNMA8AQ86V59 439 aaPredicted RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 BOLA2Q9H3K6 86 aa24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 GPBP1L1Q9HC44 474 aaPredicted RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 ADARB2Q9NS39 739 aaKnown RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 CNOT7Q9UIV1 285 aaKnown RBP24.12■■□□□ 1.45
SHROOM3-209ENST00000490690 SCN9AQ15858 1988 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 ZAP70P43403 619 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 SCNN1DP51172 638 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 ZNF280AP59817 542 aaPredicted RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 SCARF1Q14162 830 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 ZSCAN25Q6NSZ9 544 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 DZIP1Q86YF9 867 aaKnown RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 KIAA0825Q8IV33 1275 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 DNAJC2Q99543 621 aaKnown RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 PAG1Q9NWQ8 432 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 SERPINA10Q9UK55 444 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 TTF2Q9UNY4 1162 aaKnown RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 JAG2Q9Y219 1238 aa24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 ZBTB12Q9Y330 459 aaPredicted RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 COL1A1P02452 1464 aaPredicted RBP24.11■■□□□ 1.45
SHROOM3-209ENST00000490690 WDR90Q96KV7 1748 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 LDHCP07864 332 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 PLEKHM2Q8IWE5 1019 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 MICALL2Q8IY33 904 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 CERS5Q8N5B7 392 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 PI4K2BQ8TCG2 481 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 SNRKQ9NRH2 765 aa24.1■■□□□ 1.45
SHROOM3-209ENST00000490690 MYH13Q9UKX3 1938 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms