RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
SKAP2-207ENST00000490456 ABCC4O15439 1325 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 BBOX1O75936 387 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 SP8Q8IXZ3 490 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
SKAP2-207ENST00000490456 RBBP6Q7Z6E9 1792 aaKnown RBP11.2□□□□□ -0.62
SKAP2-207ENST00000490456 PAPPA2Q9BXP8 1791 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
SKAP2-207ENST00000490456 SHTN1A0MZ66 631 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 F6X3S4 739 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 RPS12P25398 132 aaKnown RBP11.19□□□□□ -0.62
SKAP2-207ENST00000490456 NEXNQ0ZGT2 675 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 FBXO46Q6PJ61 603 aaPredicted RBP11.19□□□□□ -0.62
SKAP2-207ENST00000490456 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 NLRP10Q86W26 655 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
SKAP2-207ENST00000490456 MFRPQ9BY79 579 aa11.19□□□□□ -0.62
SKAP2-207ENST00000490456 PTPRCP08575 1304 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 BCAR3O75815 825 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
SKAP2-207ENST00000490456 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
SKAP2-207ENST00000490456 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
SKAP2-207ENST00000490456 ZNF296Q8WUU4 475 aaPredicted RBP11.18□□□□□ -0.62
SKAP2-207ENST00000490456 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
SKAP2-207ENST00000490456 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
SKAP2-207ENST00000490456 TAF1P21675 1872 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 PSMD14O00487 310 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 FKBP1BP68106 108 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
SKAP2-207ENST00000490456 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
SKAP2-207ENST00000490456 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
SKAP2-207ENST00000490456 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
SKAP2-207ENST00000490456 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 EGFRP00533 1210 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 GRAPQ13588 217 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 DDX46Q7L014 1031 aaKnown RBP11.16□□□□□ -0.62
SKAP2-207ENST00000490456 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
SKAP2-207ENST00000490456 FRAT1Q92837 279 aaPredicted RBP11.16□□□□□ -0.62
SKAP2-207ENST00000490456 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
SKAP2-207ENST00000490456 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 PSME4Q14997 1843 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 KIF4BQ2VIQ3 1234 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.62
SKAP2-207ENST00000490456 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
SKAP2-207ENST00000490456 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 FAM89AQ96GI7 184 aa11.15□□□□□ -0.62
SKAP2-207ENST00000490456 API5Q9BZZ5 524 aaKnown RBP11.15□□□□□ -0.62
SKAP2-207ENST00000490456 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 GPR25O00155 361 aa11.14□□□□□ -0.63
SKAP2-207ENST00000490456 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 TBC1D8O95759 1140 aa11.14□□□□□ -0.63
SKAP2-207ENST00000490456 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 INTS3Q68E01 1043 aaKnown RBP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 ZBTB38Q8NAP3 1195 aaPredicted RBP11.14□□□□□ -0.63
SKAP2-207ENST00000490456 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
SKAP2-207ENST00000490456 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
SKAP2-207ENST00000490456 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
SKAP2-207ENST00000490456 IRS4O14654 1257 aaPredicted RBP11.13□□□□□ -0.63
SKAP2-207ENST00000490456 FKTNO75072 461 aa11.13□□□□□ -0.63
SKAP2-207ENST00000490456 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
SKAP2-207ENST00000490456 GCKRQ14397 625 aa11.13□□□□□ -0.63
SKAP2-207ENST00000490456 ARHGAP45Q92619 1136 aa11.13□□□□□ -0.63
SKAP2-207ENST00000490456 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
SKAP2-207ENST00000490456 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
SKAP2-207ENST00000490456 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
SKAP2-207ENST00000490456 ZNF609O15014 1411 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 ECE2O60344 883 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 TRIM27P14373 513 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 TM4SF4P48230 202 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 ATF7IPQ6VMQ6 1270 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 UBE3BQ7Z3V4 1068 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 EYA3Q99504 573 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
SKAP2-207ENST00000490456 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 HTTP42858 3142 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 H7C1W4 665 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
SKAP2-207ENST00000490456 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 POTEEQ6S8J3 1075 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms