RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 DACT2Q5SW24 774 aa15.24■□□□□ 0.03
FARP1-207ENST00000490389 STRIP1Q5VSL9 837 aa15.24■□□□□ 0.03
FARP1-207ENST00000490389 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
FARP1-207ENST00000490389 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
FARP1-207ENST00000490389 DBNLQ9UJU6 430 aaKnown RBP15.24■□□□□ 0.03
FARP1-207ENST00000490389 A0A1B0GUL6 1792 aa15.24■□□□□ 0.03
FARP1-207ENST00000490389 CHD4Q14839 1912 aa15.23■□□□□ 0.03
FARP1-207ENST00000490389 CCDC88AQ3V6T2 1871 aa15.23■□□□□ 0.03
FARP1-207ENST00000490389 VIL1P09327 827 aaKnown RBP15.23■□□□□ 0.03
FARP1-207ENST00000490389 ANKRD45Q5TZF3 282 aa15.23■□□□□ 0.03
FARP1-207ENST00000490389 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
FARP1-207ENST00000490389 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
FARP1-207ENST00000490389 SCNN1DP51172 638 aa15.22■□□□□ 0.03
FARP1-207ENST00000490389 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
FARP1-207ENST00000490389 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
FARP1-207ENST00000490389 RPS12P25398 132 aaKnown RBP15.21■□□□□ 0.03
FARP1-207ENST00000490389 EPS15P42566 896 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 RASGRF1Q13972 1273 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 MFSD14BQ5SR56 506 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 KIAA0825Q8IV33 1275 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
FARP1-207ENST00000490389 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 GPRC5DQ9NZD1 345 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 CNOT7Q9UIV1 285 aaKnown RBP15.21■□□□□ 0.03
FARP1-207ENST00000490389 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
FARP1-207ENST00000490389 FAM205AQ6ZU69 1335 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
FARP1-207ENST00000490389 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 SCARF1Q14162 830 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
FARP1-207ENST00000490389 PI16Q6UXB8 463 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 AGBL3Q8NEM8 1001 aa15.2■□□□□ 0.02
FARP1-207ENST00000490389 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 POTECB2RU33 542 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 H7C1D1 291 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 SEMA3EO15041 775 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 ARID4AP29374 1257 aaPredicted RBP15.19■□□□□ 0.02
FARP1-207ENST00000490389 EPHX2P34913 555 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 MCAMP43121 646 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 EAPPQ56P03 285 aaPredicted RBP15.19■□□□□ 0.02
FARP1-207ENST00000490389 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
FARP1-207ENST00000490389 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 TBC1D22AQ8WUA7 517 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 DPF2Q92785 391 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
FARP1-207ENST00000490389 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
FARP1-207ENST00000490389 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
FARP1-207ENST00000490389 OGFOD1Q8N543 542 aa15.18■□□□□ 0.02
FARP1-207ENST00000490389 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
FARP1-207ENST00000490389 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
FARP1-207ENST00000490389 GMLQ99445 158 aa15.18■□□□□ 0.02
FARP1-207ENST00000490389 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
FARP1-207ENST00000490389 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
FARP1-207ENST00000490389 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 GRIK5Q16478 980 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 GPATCH3Q96I76 525 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 HDAC9Q9UKV0 1011 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 TTF2Q9UNY4 1162 aaKnown RBP15.17■□□□□ 0.02
FARP1-207ENST00000490389 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
FARP1-207ENST00000490389 ZAP70P43403 619 aa15.16■□□□□ 0.02
FARP1-207ENST00000490389 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
FARP1-207ENST00000490389 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
FARP1-207ENST00000490389 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
FARP1-207ENST00000490389 TRPM4Q8TD43 1214 aa15.16■□□□□ 0.02
FARP1-207ENST00000490389 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
FARP1-207ENST00000490389 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
FARP1-207ENST00000490389 CLEC11AQ9Y240 323 aa15.16■□□□□ 0.02
FARP1-207ENST00000490389 KIF3CO14782 793 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 EGFRP00533 1210 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
FARP1-207ENST00000490389 PRDX5P30044 214 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 NUCB1Q02818 461 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
FARP1-207ENST00000490389 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 MYOZ2Q9NPC6 264 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
FARP1-207ENST00000490389 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
FARP1-207ENST00000490389 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
FARP1-207ENST00000490389 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
FARP1-207ENST00000490389 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
FARP1-207ENST00000490389 PDS5AQ29RF7 1337 aaKnown RBP15.14■□□□□ 0.01
FARP1-207ENST00000490389 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
FARP1-207ENST00000490389 ATP5JP18859 108 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms