RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 GCKRQ14397 625 aa25.2■■□□□ 1.62
UPK3B-205ENST00000490360 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
UPK3B-205ENST00000490360 PTPN22Q9Y2R2 807 aa25.2■■□□□ 1.62
UPK3B-205ENST00000490360 KIAA0100Q14667 2235 aaKnown RBP25.2■■□□□ 1.62
UPK3B-205ENST00000490360 IGF2BP3O00425 579 aaKnown RBP eCLIP25.19■■□□□ 1.62
UPK3B-205ENST00000490360 CHRNDQ07001 517 aa25.19■■□□□ 1.62
UPK3B-205ENST00000490360 HABP4Q5JVS0 413 aaKnown RBP25.19■■□□□ 1.62
UPK3B-205ENST00000490360 ARMC5Q96C12 935 aa25.18■■□□□ 1.62
UPK3B-205ENST00000490360 CENPFP49454 3210 aa25.18■■□□□ 1.62
UPK3B-205ENST00000490360 ANKRD18BA2A2Z9 1011 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 POTEFA5A3E0 1075 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 SPDYE2BA6NHP3 402 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 SPDYE6P0CI01 402 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 ARHGEF6Q15052 776 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 ZNF804AQ7Z570 1209 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 ANKRD13AQ8IZ07 590 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 CLMNQ96JQ2 1002 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 EFCC1Q9HA90 598 aa25.17■■□□□ 1.62
UPK3B-205ENST00000490360 SSC5DA1L4H1 1573 aa25.16■■□□□ 1.62
UPK3B-205ENST00000490360 IL1R1P14778 569 aa25.16■■□□□ 1.62
UPK3B-205ENST00000490360 CERS5Q8N5B7 392 aa25.16■■□□□ 1.62
UPK3B-205ENST00000490360 FZD1Q9UP38 647 aa25.16■■□□□ 1.62
UPK3B-205ENST00000490360 TESPA1A2RU30 521 aaPredicted RBP25.15■■□□□ 1.62
UPK3B-205ENST00000490360 SLC4A2P04920 1241 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 SP3Q02447 781 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 CRHR2Q13324 411 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 TNFAIP1Q13829 316 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 CFAP100Q494V2 611 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 LINS1Q8NG48 757 aa25.15■■□□□ 1.62
UPK3B-205ENST00000490360 CACNA1FO60840 1977 aa25.14■■□□□ 1.62
UPK3B-205ENST00000490360 CASP7P55210 303 aa25.14■■□□□ 1.62
UPK3B-205ENST00000490360 PRKRIP1Q9H875 184 aaPredicted RBP25.14■■□□□ 1.62
UPK3B-205ENST00000490360 IRS2Q9Y4H2 1338 aa25.13■■□□□ 1.61
UPK3B-205ENST00000490360 USP2O75604 605 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-205ENST00000490360 IFIT5Q13325 482 aaKnown RBP25.13■■□□□ 1.61
UPK3B-205ENST00000490360 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-205ENST00000490360 CD99L2Q8TCZ2 262 aa25.13■■□□□ 1.61
UPK3B-205ENST00000490360 PRMT6Q96LA8 375 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-205ENST00000490360 VEZTQ9HBM0 779 aa25.13■■□□□ 1.61
UPK3B-205ENST00000490360 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-205ENST00000490360 CLRN2A0PK11 232 aa25.12■■□□□ 1.61
UPK3B-205ENST00000490360 NBPF12Q5TAG4 269 aaPredicted RBP25.12■■□□□ 1.61
UPK3B-205ENST00000490360 DNAAF4Q8WXU2 420 aa25.12■■□□□ 1.61
UPK3B-205ENST00000490360 TMEM106CQ9BVX2 250 aa25.12■■□□□ 1.61
UPK3B-205ENST00000490360 F8W031 263 aaPredicted RBP25.11■■□□□ 1.61
UPK3B-205ENST00000490360 FLIIQ13045 1269 aa25.11■■□□□ 1.61
UPK3B-205ENST00000490360 RASA3Q14644 834 aa25.11■■□□□ 1.61
UPK3B-205ENST00000490360 G2E3Q7L622 706 aa25.11■■□□□ 1.61
UPK3B-205ENST00000490360 NBPF11Q86T75 865 aa25.11■■□□□ 1.61
UPK3B-205ENST00000490360 TAF5LO75529 589 aa25.1■■□□□ 1.61
UPK3B-205ENST00000490360 RBM5P52756 815 aaKnown RBP eCLIP25.1■■□□□ 1.61
UPK3B-205ENST00000490360 CCDC27Q2M243 656 aa25.1■■□□□ 1.61
UPK3B-205ENST00000490360 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
UPK3B-205ENST00000490360 GJA5P36382 358 aa25.09■■□□□ 1.61
UPK3B-205ENST00000490360 FKBP5Q13451 457 aaPredicted RBP25.09■■□□□ 1.61
UPK3B-205ENST00000490360 PTPN18Q99952 460 aa25.09■■□□□ 1.61
UPK3B-205ENST00000490360 OPTNQ96CV9 577 aa25.08■■□□□ 1.61
UPK3B-205ENST00000490360 SERPINA10Q9UK55 444 aa25.08■■□□□ 1.61
UPK3B-205ENST00000490360 PCDHAC2Q9Y5I4 1007 aa25.08■■□□□ 1.61
UPK3B-205ENST00000490360 A0A1B0GUL6 1792 aa25.08■■□□□ 1.6
UPK3B-205ENST00000490360 WDHD1O75717 1129 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-205ENST00000490360 EN2P19622 333 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-205ENST00000490360 HELBQ8NG08 1087 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-205ENST00000490360 FAM205AQ6ZU69 1335 aa25.07■■□□□ 1.6
UPK3B-205ENST00000490360 SNAP23O00161 211 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 GTF2A2P52657 109 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 SPDYE2Q495Y8 402 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 ZNF333Q96JL9 665 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 MS4A4AQ96JQ5 239 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 ZFYVE28Q9HCC9 887 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 IL16Q14005 1332 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 BRCA2P51587 3418 aa25.06■■□□□ 1.6
UPK3B-205ENST00000490360 SLC9C1Q4G0N8 1177 aa25.05■■□□□ 1.6
UPK3B-205ENST00000490360 ELP3Q9H9T3 547 aa25.05■■□□□ 1.6
UPK3B-205ENST00000490360 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
UPK3B-205ENST00000490360 TNNI2P48788 182 aa25.04■■□□□ 1.6
UPK3B-205ENST00000490360 FOXO4P98177 505 aa25.04■■□□□ 1.6
UPK3B-205ENST00000490360 CCDC57Q2TAC2 916 aa25.04■■□□□ 1.6
UPK3B-205ENST00000490360 ZNF70Q9UC06 446 aaPredicted RBP25.04■■□□□ 1.6
UPK3B-205ENST00000490360 CHMP3Q9Y3E7 222 aa25.04■■□□□ 1.6
UPK3B-205ENST00000490360 TAF1CQ15572 869 aaPredicted RBP25.03■■□□□ 1.6
UPK3B-205ENST00000490360 NCBP3Q53F19 620 aaKnown RBP25.03■■□□□ 1.6
UPK3B-205ENST00000490360 TAF7LQ5H9L4 462 aa25.03■■□□□ 1.6
UPK3B-205ENST00000490360 MFSD14BQ5SR56 506 aa25.03■■□□□ 1.6
UPK3B-205ENST00000490360 LDHAL6AQ6ZMR3 332 aa25.03■■□□□ 1.6
UPK3B-205ENST00000490360 WWC1Q8IX03 1113 aa25.03■■□□□ 1.6
UPK3B-205ENST00000490360 MAP3K9P80192 1104 aa25.02■■□□□ 1.6
UPK3B-205ENST00000490360 ZCCHC17Q9NP64 241 aaKnown RBP25.02■■□□□ 1.6
UPK3B-205ENST00000490360 TTF2Q9UNY4 1162 aaKnown RBP25.02■■□□□ 1.6
UPK3B-205ENST00000490360 CSADQ9Y600 493 aa25.02■■□□□ 1.6
UPK3B-205ENST00000490360 CCL15-CCL14A0A0B4J2E2 113 aa25.01■■□□□ 1.59
UPK3B-205ENST00000490360 FXR1P51114 621 aaKnown RBP eCLIP25.01■■□□□ 1.59
UPK3B-205ENST00000490360 UBE4AQ14139 1066 aa25.01■■□□□ 1.59
UPK3B-205ENST00000490360 CCL15Q16663 113 aa25.01■■□□□ 1.59
UPK3B-205ENST00000490360 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.01■■□□□ 1.59
UPK3B-205ENST00000490360 TDRD7Q8NHU6 1098 aaKnown RBP25.01■■□□□ 1.59
UPK3B-205ENST00000490360 CNNM1Q9NRU3 951 aa25.01■■□□□ 1.59
UPK3B-205ENST00000490360 GNRH1P01148 92 aa25■■□□□ 1.59
UPK3B-205ENST00000490360 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
UPK3B-205ENST00000490360 LMBR1LQ6UX01 489 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms