RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 CXCL9Q07325 125 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 TNIP1Q15025 636 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 OSBPL3Q9H4L5 887 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 DBNDD1Q9H9R9 158 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 USP17L3A6NCW0 530 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 USP17L4A6NCW7 530 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 TOMM70O94826 608 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
HDAC1-210ENST00000490081 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 GPC2Q8N158 579 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 TBC1D22AQ8WUA7 517 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 SUGT1Q9Y2Z0 365 aa15.27■□□□□ 0.04
HDAC1-210ENST00000490081 AOX1Q06278 1338 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
HDAC1-210ENST00000490081 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 TMED8Q6PL24 325 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-210ENST00000490081 AGBL3Q8NEM8 1001 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
HDAC1-210ENST00000490081 TLR7Q9NYK1 1049 aaKnown RBP15.26■□□□□ 0.03
HDAC1-210ENST00000490081 GLTPD2A6NH11 291 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 DACT2Q5SW24 774 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
HDAC1-210ENST00000490081 DPF2Q92785 391 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 GMLQ99445 158 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 MRIQ9BWK5 157 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
HDAC1-210ENST00000490081 ERC2O15083 957 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 MX1P20591 662 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 MCAMP43121 646 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 PDE1AP54750 535 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
HDAC1-210ENST00000490081 SPATA5Q8NB90 893 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-210ENST00000490081 KCNQ5Q9NR82 932 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
HDAC1-210ENST00000490081 PSMD14O00487 310 aa15.23■□□□□ 0.03
HDAC1-210ENST00000490081 FRAT2O75474 233 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-210ENST00000490081 GLRX3O76003 335 aaKnown RBP15.23■□□□□ 0.03
HDAC1-210ENST00000490081 GTF2IP78347 998 aa15.23■□□□□ 0.03
HDAC1-210ENST00000490081 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-210ENST00000490081 PLEKHM2Q8IWE5 1019 aa15.23■□□□□ 0.03
HDAC1-210ENST00000490081 HAUS7Q99871 368 aa15.23■□□□□ 0.03
HDAC1-210ENST00000490081 RAD17O75943 681 aa15.22■□□□□ 0.03
HDAC1-210ENST00000490081 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
HDAC1-210ENST00000490081 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
HDAC1-210ENST00000490081 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
HDAC1-210ENST00000490081 SCN4AP35499 1836 aa15.22■□□□□ 0.03
HDAC1-210ENST00000490081 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.03
HDAC1-210ENST00000490081 SCARF1Q14162 830 aa15.21■□□□□ 0.03
HDAC1-210ENST00000490081 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-210ENST00000490081 SPTY2D1Q68D10 685 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-210ENST00000490081 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-210ENST00000490081 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-210ENST00000490081 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 PDE4AP27815 886 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 APLP1P51693 650 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 MFSD14BQ5SR56 506 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 RRAGCQ9HB90 399 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-210ENST00000490081 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
HDAC1-210ENST00000490081 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-210ENST00000490081 ZAP70P43403 619 aa15.19■□□□□ 0.02
HDAC1-210ENST00000490081 ZNF280AP59817 542 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-210ENST00000490081 MAST3O60307 1309 aa15.18■□□□□ 0.02
HDAC1-210ENST00000490081 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-210ENST00000490081 MTMR14Q8NCE2 650 aa15.18■□□□□ 0.02
HDAC1-210ENST00000490081 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-210ENST00000490081 BOLA2Q9H3K6 86 aa15.18■□□□□ 0.02
HDAC1-210ENST00000490081 GPRC5DQ9NZD1 345 aa15.18■□□□□ 0.02
HDAC1-210ENST00000490081 MYO5AQ9Y4I1 1855 aaKnown RBP15.17■□□□□ 0.02
HDAC1-210ENST00000490081 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
HDAC1-210ENST00000490081 USP17L8P0C7I0 530 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-210ENST00000490081 SCNN1DP51172 638 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 FSTL1Q12841 308 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-210ENST00000490081 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 PI16Q6UXB8 463 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 PAG1Q9NWQ8 432 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 GJA3Q9Y6H8 435 aa15.17■□□□□ 0.02
HDAC1-210ENST00000490081 IQCA1LA6NCM1 817 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms