RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 DPF2Q92785 391 aa17.51■□□□□ 0.39
COMMD2-206ENST00000490008 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
COMMD2-206ENST00000490008 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
COMMD2-206ENST00000490008 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
COMMD2-206ENST00000490008 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
COMMD2-206ENST00000490008 DBNLQ9UJU6 430 aaKnown RBP17.51■□□□□ 0.39
COMMD2-206ENST00000490008 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
COMMD2-206ENST00000490008 MYO3BQ8WXR4 1341 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
COMMD2-206ENST00000490008 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 MXD3Q9BW11 206 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 HDAC9Q9UKV0 1011 aa17.5■□□□□ 0.39
COMMD2-206ENST00000490008 FAM205AQ6ZU69 1335 aa17.49■□□□□ 0.39
COMMD2-206ENST00000490008 USP17L8P0C7I0 530 aa17.49■□□□□ 0.39
COMMD2-206ENST00000490008 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
COMMD2-206ENST00000490008 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
COMMD2-206ENST00000490008 ZNF784Q8NCA9 323 aaPredicted RBP17.49■□□□□ 0.39
COMMD2-206ENST00000490008 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
COMMD2-206ENST00000490008 TLR7Q9NYK1 1049 aaKnown RBP17.49■□□□□ 0.39
COMMD2-206ENST00000490008 F8W031 263 aaPredicted RBP17.48■□□□□ 0.39
COMMD2-206ENST00000490008 EPS15P42566 896 aa17.48■□□□□ 0.39
COMMD2-206ENST00000490008 MMP14P50281 582 aa17.48■□□□□ 0.39
COMMD2-206ENST00000490008 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
COMMD2-206ENST00000490008 SPTY2D1Q68D10 685 aaPredicted RBP17.48■□□□□ 0.39
COMMD2-206ENST00000490008 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
COMMD2-206ENST00000490008 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
COMMD2-206ENST00000490008 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
COMMD2-206ENST00000490008 GPRC5DQ9NZD1 345 aa17.48■□□□□ 0.39
COMMD2-206ENST00000490008 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
COMMD2-206ENST00000490008 EPHX2P34913 555 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 KIAA0825Q8IV33 1275 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 MICALL2Q8IY33 904 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
COMMD2-206ENST00000490008 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 ABCF2Q9UG63 623 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 COL4A5P29400 1685 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 ZNF609O15014 1411 aa17.47■□□□□ 0.39
COMMD2-206ENST00000490008 SBF1O95248 1867 aa17.46■□□□□ 0.39
COMMD2-206ENST00000490008 SCNN1DP51172 638 aa17.46■□□□□ 0.39
COMMD2-206ENST00000490008 RBM5P52756 815 aaKnown RBP eCLIP17.46■□□□□ 0.39
COMMD2-206ENST00000490008 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
COMMD2-206ENST00000490008 PNMA8AQ86V59 439 aaPredicted RBP17.46■□□□□ 0.39
COMMD2-206ENST00000490008 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
COMMD2-206ENST00000490008 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
COMMD2-206ENST00000490008 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
COMMD2-206ENST00000490008 LTBP1Q14766 1721 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 LDHBP07195 334 aaKnown RBP17.45■□□□□ 0.38
COMMD2-206ENST00000490008 NUCB1Q02818 461 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 GMLQ99445 158 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
COMMD2-206ENST00000490008 LRP2BPQ9P2M1 347 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
COMMD2-206ENST00000490008 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
COMMD2-206ENST00000490008 POTECB2RU33 542 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 ERC2O15083 957 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 ZBTB22O15209 634 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 ATP5JP18859 108 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 MCAMP43121 646 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 USP50Q70EL3 339 aaPredicted RBP17.44■□□□□ 0.38
COMMD2-206ENST00000490008 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 CERS5Q8N5B7 392 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
COMMD2-206ENST00000490008 CHD4Q14839 1912 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 ZAP70P43403 619 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 SCARF1Q14162 830 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 TBC1D10BQ4KMP7 808 aaPredicted RBP17.43■□□□□ 0.38
COMMD2-206ENST00000490008 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 MYOZ2Q9NPC6 264 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 CCDC88AQ3V6T2 1871 aa17.43■□□□□ 0.38
COMMD2-206ENST00000490008 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
COMMD2-206ENST00000490008 ZNF280AP59817 542 aaPredicted RBP17.42■□□□□ 0.38
COMMD2-206ENST00000490008 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
COMMD2-206ENST00000490008 DLGAP5Q15398 846 aa17.42■□□□□ 0.38
COMMD2-206ENST00000490008 PI16Q6UXB8 463 aa17.42■□□□□ 0.38
COMMD2-206ENST00000490008 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
COMMD2-206ENST00000490008 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
COMMD2-206ENST00000490008 SLF2Q8IX21 1173 aa17.42■□□□□ 0.38
COMMD2-206ENST00000490008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD2-206ENST00000490008 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
COMMD2-206ENST00000490008 MAST3O60307 1309 aa17.42■□□□□ 0.38
COMMD2-206ENST00000490008 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
COMMD2-206ENST00000490008 MX1P20591 662 aa17.41■□□□□ 0.38
COMMD2-206ENST00000490008 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
COMMD2-206ENST00000490008 TTC41PQ6P2S7 1318 aa17.41■□□□□ 0.38
COMMD2-206ENST00000490008 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
COMMD2-206ENST00000490008 MYO1BO43795 1136 aa17.4■□□□□ 0.38
COMMD2-206ENST00000490008 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
COMMD2-206ENST00000490008 LDHCP07864 332 aa17.4■□□□□ 0.38
COMMD2-206ENST00000490008 GSTO1P78417 241 aa17.4■□□□□ 0.38
COMMD2-206ENST00000490008 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
COMMD2-206ENST00000490008 KIF4BQ2VIQ3 1234 aa17.4■□□□□ 0.38
COMMD2-206ENST00000490008 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms