RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 APOBEC3FQ8IUX4 373 aaKnown RBP10.43□□□□□ -0.74
SMG5-205ENST00000489907 DNAAF4Q8WXU2 420 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 PRMT6Q96LA8 375 aaPredicted RBP10.43□□□□□ -0.74
SMG5-205ENST00000489907 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 DEFB129Q9H1M3 183 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 COL1A1P02452 1464 aaPredicted RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 CAP1Q01518 475 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 BEND3Q5T5X7 828 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 FBXO46Q6PJ61 603 aaPredicted RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 HELBQ8NG08 1087 aaPredicted RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 CLMNQ96JQ2 1002 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 MPHOSPH8Q99549 860 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 PCDH10Q9P2E7 1040 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 OTOFQ9HC10 1997 aa10.42□□□□□ -0.74
SMG5-205ENST00000489907 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
SMG5-205ENST00000489907 CENPFP49454 3210 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 IGF2BP3O00425 579 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMG5-205ENST00000489907 USP2O75604 605 aaPredicted RBP10.41□□□□□ -0.74
SMG5-205ENST00000489907 GJA5P36382 358 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 FKBP1AP62942 108 aaKnown RBP10.41□□□□□ -0.74
SMG5-205ENST00000489907 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
SMG5-205ENST00000489907 ARMC9Q7Z3E5 817 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 KAZALD1Q96I82 304 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 HDAC9Q9UKV0 1011 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 BRCA2P51587 3418 aa10.41□□□□□ -0.74
SMG5-205ENST00000489907 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 ANKRD18BA2A2Z9 1011 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 UNCXA6NJT0 531 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 F6X3S4 739 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 ANP32CO43423 234 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 FKTNO75072 461 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 SPDYE6P0CI01 402 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 NF2P35240 595 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 INHBEP58166 350 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 SREBF2Q12772 1141 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 DLGAP5Q15398 846 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 NBPF12Q5TAG4 269 aaPredicted RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 WNK4Q96J92 1243 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 ZNF594Q96JF6 807 aaPredicted RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 PTPN18Q99952 460 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 MYH16Q9H6N6 1097 aa10.4□□□□□ -0.74
SMG5-205ENST00000489907 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
SMG5-205ENST00000489907 FAM205AQ6ZU69 1335 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 ARAP2Q8WZ64 1704 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 MANSC4A6NHS7 340 aaPredicted RBP10.39□□□□□ -0.75
SMG5-205ENST00000489907 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 ZBTB48P10074 688 aaPredicted RBP10.39□□□□□ -0.75
SMG5-205ENST00000489907 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
SMG5-205ENST00000489907 CFAP100Q494V2 611 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 WDR63Q8IWG1 891 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 TDRD7Q8NHU6 1098 aaKnown RBP10.39□□□□□ -0.75
SMG5-205ENST00000489907 SLC10A4Q96EP9 437 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 TEPSINQ96N21 525 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 PPP2R3BQ9Y5P8 575 aa10.39□□□□□ -0.75
SMG5-205ENST00000489907 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
SMG5-205ENST00000489907 IFIT5Q13325 482 aaKnown RBP10.38□□□□□ -0.75
SMG5-205ENST00000489907 OTOP1Q7RTM1 612 aa10.38□□□□□ -0.75
SMG5-205ENST00000489907 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
SMG5-205ENST00000489907 MS4A4AQ96JQ5 239 aa10.38□□□□□ -0.75
SMG5-205ENST00000489907 FAM84BQ96KN1 310 aaPredicted RBP10.38□□□□□ -0.75
SMG5-205ENST00000489907 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 F8W031 263 aaPredicted RBP10.37□□□□□ -0.75
SMG5-205ENST00000489907 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 RASA3Q14644 834 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 GRIK5Q16478 980 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 PUS3Q9BZE2 481 aaKnown RBP10.37□□□□□ -0.75
SMG5-205ENST00000489907 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 RIPOR2Q9Y4F9 1068 aa10.37□□□□□ -0.75
SMG5-205ENST00000489907 GRM8O00222 908 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 PPP1R12BO60237 982 aaPredicted RBP10.36□□□□□ -0.75
SMG5-205ENST00000489907 KCNJ4P48050 445 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 CRHR2Q13324 411 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 SUPT20HL1Q3ZLR7 823 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 SPDYE2Q495Y8 402 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 LDHAL6AQ6ZMR3 332 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.36□□□□□ -0.75
SMG5-205ENST00000489907 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
SMG5-205ENST00000489907 UTYO14607 1347 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 GYG1P46976 350 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 SUCLG2Q96I99 432 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 TDRD3Q9H7E2 651 aaKnown RBP10.35□□□□□ -0.75
SMG5-205ENST00000489907 ZNF70Q9UC06 446 aaPredicted RBP10.35□□□□□ -0.75
SMG5-205ENST00000489907 SERPINA10Q9UK55 444 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 PTPN22Q9Y2R2 807 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 TRIM17Q9Y577 477 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 ZSWIM8A7E2V4 1837 aa10.35□□□□□ -0.75
SMG5-205ENST00000489907 PLIN1O60240 522 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms