RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 KLHDC7BQ96G42 594 aa9.42□□□□□ -0.9
CCDC39-206ENST00000489868 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
CCDC39-206ENST00000489868 SRA1Q9HD15 236 aaKnown RBP9.42□□□□□ -0.9
CCDC39-206ENST00000489868 WISP1O95388 367 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 APBA3O96018 575 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
CCDC39-206ENST00000489868 ITPKAP23677 461 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 TAGLNQ01995 201 aaKnown RBP9.41□□□□□ -0.9
CCDC39-206ENST00000489868 ZNF423Q2M1K9 1284 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 MAP4K3Q8IVH8 894 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
CCDC39-206ENST00000489868 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
CCDC39-206ENST00000489868 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 CABP4P57796 275 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 PIP4K2BP78356 416 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 IKBKEQ14164 716 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 ADGRE1Q14246 886 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 ALG1LQ6GMV1 187 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 SPOCK3Q9BQ16 436 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 ZNF576Q9H609 170 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.9
CCDC39-206ENST00000489868 CD68P34810 354 aaPredicted RBP9.39□□□□□ -0.91
CCDC39-206ENST00000489868 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
CCDC39-206ENST00000489868 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 PCDH1Q08174 1060 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 FAM117BQ6P1L5 589 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 WNT8BQ93098 351 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 NACC1Q96RE7 527 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 CLEC4MQ9H2X3 399 aaPredicted RBP9.38□□□□□ -0.91
CCDC39-206ENST00000489868 USP21Q9UK80 565 aa9.38□□□□□ -0.91
CCDC39-206ENST00000489868 C9orf172C9J069 976 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 ALX3O95076 343 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 FCGRTP55899 365 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 NLRP12P59046 1061 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 FAAP100Q0VG06 881 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
CCDC39-206ENST00000489868 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 OSGEPQ9NPF4 335 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 TRAK1Q9UPV9 953 aa9.37□□□□□ -0.91
CCDC39-206ENST00000489868 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
CCDC39-206ENST00000489868 C19orf57Q0VDD7 668 aa9.36□□□□□ -0.91
CCDC39-206ENST00000489868 AGGF1Q8N302 714 aaeCLIP9.36□□□□□ -0.91
CCDC39-206ENST00000489868 DUSP9Q99956 384 aaKnown RBP9.36□□□□□ -0.91
CCDC39-206ENST00000489868 NRSN2Q9GZP1 204 aa9.36□□□□□ -0.91
CCDC39-206ENST00000489868 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
CCDC39-206ENST00000489868 B3GALT4O96024 378 aa9.35□□□□□ -0.91
CCDC39-206ENST00000489868 NOS3P29474 1203 aa9.35□□□□□ -0.91
CCDC39-206ENST00000489868 PTPN12Q05209 780 aaKnown RBP9.35□□□□□ -0.91
CCDC39-206ENST00000489868 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
CCDC39-206ENST00000489868 KIAA1211Q6ZU35 1233 aa9.35□□□□□ -0.91
CCDC39-206ENST00000489868 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.35□□□□□ -0.91
CCDC39-206ENST00000489868 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
CCDC39-206ENST00000489868 MSTNO14793 375 aa9.34□□□□□ -0.91
CCDC39-206ENST00000489868 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
CCDC39-206ENST00000489868 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
CCDC39-206ENST00000489868 NRG1Q02297 640 aaPredicted RBP9.34□□□□□ -0.91
CCDC39-206ENST00000489868 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
CCDC39-206ENST00000489868 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
CCDC39-206ENST00000489868 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
CCDC39-206ENST00000489868 DLGAP3O95886 979 aa9.33□□□□□ -0.92
CCDC39-206ENST00000489868 GSTM4Q03013 218 aa9.33□□□□□ -0.92
CCDC39-206ENST00000489868 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
CCDC39-206ENST00000489868 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
CCDC39-206ENST00000489868 TRIM56Q9BRZ2 755 aaKnown RBP9.33□□□□□ -0.92
CCDC39-206ENST00000489868 ECEL1O95672 775 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 CTSBP07858 339 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 GNA15P30679 374 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 GATA4P43694 442 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
CCDC39-206ENST00000489868 ACAD11Q709F0 780 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 C12orf49Q9H741 205 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
CCDC39-206ENST00000489868 ERCC3P19447 782 aa9.31□□□□□ -0.92
CCDC39-206ENST00000489868 ARL4DP49703 201 aa9.31□□□□□ -0.92
CCDC39-206ENST00000489868 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
CCDC39-206ENST00000489868 RPS26P11Q5JNZ5 115 aaPredicted RBP9.31□□□□□ -0.92
CCDC39-206ENST00000489868 DCAF11Q8TEB1 546 aa9.31□□□□□ -0.92
CCDC39-206ENST00000489868 MEGF10Q96KG7 1140 aa9.31□□□□□ -0.92
CCDC39-206ENST00000489868 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
CCDC39-206ENST00000489868 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 IGHA1P01876 353 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 DOC2BQ14184 412 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 Q6ZS46 218 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 USP26Q9BXU7 913 aa9.3□□□□□ -0.92
CCDC39-206ENST00000489868 TPSG1Q9NRR2 321 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms