RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 COL1A1P02452 1464 aaPredicted RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 CCL15-CCL14A0A0B4J2E2 113 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 TLR2O60603 784 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 ANXA1P04083 346 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 DSG3P32926 999 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 EIF4A1P60842 406 aaKnown RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 RPS8P62241 208 aaKnown RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 KIF22Q14807 665 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 CCL15Q16663 113 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 NBPF12Q5TAG4 269 aaPredicted RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 OGFOD1Q8N543 542 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 MAFAQ8NHW3 353 aaPredicted RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
COL9A1-209ENST00000489861 PCGF6Q9BYE7 350 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 ELP3Q9H9T3 547 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 NPM3O75607 178 aaKnown RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 OSBPP22059 807 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 MAP3K12Q12852 859 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 RAET1EQ8TD07 263 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 DIS3LQ8TF46 1054 aaKnown RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 SYMPKQ92797 1274 aaKnown RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 PAWRQ96IZ0 340 aaKnown RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 BIN2Q9UBW5 565 aaPredicted RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 KNSTRNQ9Y448 316 aa9.67□□□□□ -0.86
COL9A1-209ENST00000489861 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
COL9A1-209ENST00000489861 COL2A1P02458 1487 aaPredicted RBP9.66□□□□□ -0.86
COL9A1-209ENST00000489861 PSMC4P43686 418 aa9.66□□□□□ -0.86
COL9A1-209ENST00000489861 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
COL9A1-209ENST00000489861 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL9A1-209ENST00000489861 ANKRD13AQ8IZ07 590 aa9.66□□□□□ -0.86
COL9A1-209ENST00000489861 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
COL9A1-209ENST00000489861 CDX2Q99626 313 aaPredicted RBP9.66□□□□□ -0.86
COL9A1-209ENST00000489861 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
COL9A1-209ENST00000489861 SEC31BQ9NQW1 1179 aa9.66□□□□□ -0.86
COL9A1-209ENST00000489861 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
COL9A1-209ENST00000489861 TFRCP02786 760 aaKnown RBP9.65□□□□□ -0.86
COL9A1-209ENST00000489861 C17orf99Q6UX52 265 aa9.65□□□□□ -0.86
COL9A1-209ENST00000489861 KIAA0825Q8IV33 1275 aa9.65□□□□□ -0.86
COL9A1-209ENST00000489861 FBXW7Q969H0 707 aa9.65□□□□□ -0.86
COL9A1-209ENST00000489861 AOX1Q06278 1338 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 MYPNQ86TC9 1320 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 SYNGAP1Q96PV0 1343 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 SPEF2Q9C093 1822 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 BTBD19C9JJ37 291 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 GTF2A2P52657 109 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 UBXN2AP68543 259 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 SUPT20HL1Q3ZLR7 823 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-209ENST00000489861 STRIP1Q5VSL9 837 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-209ENST00000489861 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-209ENST00000489861 DEFB118Q96PH6 123 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-209ENST00000489861 CPA4Q9UI42 421 aa9.64□□□□□ -0.87
COL9A1-209ENST00000489861 DDX60LQ5H9U9 1706 aaKnown RBP9.64□□□□□ -0.87
COL9A1-209ENST00000489861 ZNF804BA4D1E1 1349 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 MYO3BQ8WXR4 1341 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 PRKCZQ05513 592 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 AIMP1Q12904 312 aaKnown RBP9.63□□□□□ -0.87
COL9A1-209ENST00000489861 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 SNX27Q96L92 541 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 CRISPLD2Q9H0B8 497 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 GABRQQ9UN88 632 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 PPP2R3BQ9Y5P8 575 aa9.63□□□□□ -0.87
COL9A1-209ENST00000489861 XDHP47989 1333 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 CLRN2A0PK11 232 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
COL9A1-209ENST00000489861 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
COL9A1-209ENST00000489861 HOXD10P28358 340 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 VGLL4Q14135 290 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 MYLIPQ8WY64 445 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
COL9A1-209ENST00000489861 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
COL9A1-209ENST00000489861 ADGRA2Q96PE1 1338 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 ELNP15502 786 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 EIF2S2P20042 333 aaKnown RBP9.61□□□□□ -0.87
COL9A1-209ENST00000489861 ATP2B4P23634 1241 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 MMP14P50281 582 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 DLGAP5Q15398 846 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 SEMA6BQ9H3T3 888 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 MED23Q9ULK4 1368 aa9.61□□□□□ -0.87
COL9A1-209ENST00000489861 TCF20Q9UGU0 1960 aaKnown RBP9.61□□□□□ -0.87
COL9A1-209ENST00000489861 IRS4O14654 1257 aaPredicted RBP9.6□□□□□ -0.87
COL9A1-209ENST00000489861 ADCY3O60266 1144 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms