RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
VPS26A-206ENST00000489794 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
VPS26A-206ENST00000489794 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
VPS26A-206ENST00000489794 NID1P14543 1247 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 GRIA4P48058 902 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 MRPL58Q14197 206 aaKnown RBP9.5□□□□□ -0.89
VPS26A-206ENST00000489794 WNT8BQ93098 351 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 CRELD1Q96HD1 420 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 HHIPQ96QV1 700 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 CLEC4MQ9H2X3 399 aaPredicted RBP9.5□□□□□ -0.89
VPS26A-206ENST00000489794 NOP53Q9NZM5 478 aaKnown RBP9.5□□□□□ -0.89
VPS26A-206ENST00000489794 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
VPS26A-206ENST00000489794 HOXB4P17483 251 aaPredicted RBP9.49□□□□□ -0.89
VPS26A-206ENST00000489794 FCGRTP55899 365 aa9.49□□□□□ -0.89
VPS26A-206ENST00000489794 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
VPS26A-206ENST00000489794 MRRFQ96E11 262 aaKnown RBP9.49□□□□□ -0.89
VPS26A-206ENST00000489794 H3BRJ5 948 aa9.48□□□□□ -0.89
VPS26A-206ENST00000489794 USP17L7P0C7H9 530 aa9.48□□□□□ -0.89
VPS26A-206ENST00000489794 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
VPS26A-206ENST00000489794 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
VPS26A-206ENST00000489794 ARL4DP49703 201 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 RAC1P63000 192 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 PIP4K2BP78356 416 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
VPS26A-206ENST00000489794 LINC00114Q6XXX2 140 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 FAM161BQ96MY7 647 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 CEP44Q9C0F1 390 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 ZNF576Q9H609 170 aa9.47□□□□□ -0.89
VPS26A-206ENST00000489794 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 E9PSI1 815 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 BAG6P46379 1132 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 ST13P50502 369 aaKnown RBP9.46□□□□□ -0.9
VPS26A-206ENST00000489794 IKBKEQ14164 716 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 SPRED3Q2MJR0 410 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 VN1R5Q7Z5H4 357 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 SOX17Q9H6I2 414 aaPredicted RBP9.46□□□□□ -0.9
VPS26A-206ENST00000489794 OSGEPQ9NPF4 335 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
VPS26A-206ENST00000489794 IGHA1P01876 353 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 EPHA1P21709 976 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
VPS26A-206ENST00000489794 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
VPS26A-206ENST00000489794 DMRTC2Q8IXT2 367 aaPredicted RBP9.45□□□□□ -0.9
VPS26A-206ENST00000489794 KLHL23Q8NBE8 558 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
VPS26A-206ENST00000489794 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
VPS26A-206ENST00000489794 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
VPS26A-206ENST00000489794 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
VPS26A-206ENST00000489794 USP31Q70CQ4 1352 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 B3GALT4O96024 378 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 ESRRAP11474 423 aaPredicted RBP9.43□□□□□ -0.9
VPS26A-206ENST00000489794 TRIM28Q13263 835 aaKnown RBP9.43□□□□□ -0.9
VPS26A-206ENST00000489794 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 TRIM11Q96F44 468 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 PLVAPQ9BX97 442 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
VPS26A-206ENST00000489794 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
VPS26A-206ENST00000489794 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
VPS26A-206ENST00000489794 FSCN2O14926 492 aa9.42□□□□□ -0.9
VPS26A-206ENST00000489794 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
VPS26A-206ENST00000489794 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
VPS26A-206ENST00000489794 TTF2Q9UNY4 1162 aaKnown RBP9.42□□□□□ -0.9
VPS26A-206ENST00000489794 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 CTSHP09668 335 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 RLBP1P12271 317 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 NOC4LQ9BVI4 516 aaKnown RBP9.41□□□□□ -0.9
VPS26A-206ENST00000489794 METTL5Q9NRN9 209 aaKnown RBP9.41□□□□□ -0.9
VPS26A-206ENST00000489794 TMEM39AQ9NV64 488 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 KIAA1522Q9P206 1035 aaPredicted RBP9.41□□□□□ -0.9
VPS26A-206ENST00000489794 SAMM50Q9Y512 469 aa9.41□□□□□ -0.9
VPS26A-206ENST00000489794 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS26A-206ENST00000489794 SETDB1Q15047 1291 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
VPS26A-206ENST00000489794 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 ZNF428Q96B54 188 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
VPS26A-206ENST00000489794 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
VPS26A-206ENST00000489794 SOX1O00570 391 aaPredicted RBP9.39□□□□□ -0.91
VPS26A-206ENST00000489794 SCAMP3O14828 347 aaKnown RBP9.39□□□□□ -0.91
VPS26A-206ENST00000489794 ELNP15502 786 aa9.39□□□□□ -0.91
VPS26A-206ENST00000489794 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
VPS26A-206ENST00000489794 ZNF423Q2M1K9 1284 aa9.39□□□□□ -0.91
VPS26A-206ENST00000489794 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
VPS26A-206ENST00000489794 RECKO95980 971 aa9.38□□□□□ -0.91
VPS26A-206ENST00000489794 CYP11A1P05108 521 aa9.38□□□□□ -0.91
VPS26A-206ENST00000489794 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
VPS26A-206ENST00000489794 CCDC85BQ15834 202 aaPredicted RBP9.38□□□□□ -0.91
VPS26A-206ENST00000489794 HP1BP3Q5SSJ5 553 aaPredicted RBP9.38□□□□□ -0.91
VPS26A-206ENST00000489794 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
VPS26A-206ENST00000489794 CDC25BP30305 580 aa9.37□□□□□ -0.91
VPS26A-206ENST00000489794 CD68P34810 354 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms