RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
VPS26A-205ENST00000489656 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
VPS26A-205ENST00000489656 DENND2AQ9ULE3 1009 aa17.12■□□□□ 0.33
VPS26A-205ENST00000489656 PSDA5PKW4 1024 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-205ENST00000489656 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-205ENST00000489656 KLRK1P26718 216 aa17.11■□□□□ 0.33
VPS26A-205ENST00000489656 PTGER2P43116 358 aa17.11■□□□□ 0.33
VPS26A-205ENST00000489656 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-205ENST00000489656 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
VPS26A-205ENST00000489656 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
VPS26A-205ENST00000489656 C7orf43Q8WVR3 580 aa17.11■□□□□ 0.33
VPS26A-205ENST00000489656 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-205ENST00000489656 KCNA3P22001 575 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 RBM25P49756 843 aaKnown RBP17.1■□□□□ 0.33
VPS26A-205ENST00000489656 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
VPS26A-205ENST00000489656 ZNF804AQ7Z570 1209 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 MPNDQ8N594 471 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 CD2APQ9Y5K6 639 aa17.1■□□□□ 0.33
VPS26A-205ENST00000489656 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
VPS26A-205ENST00000489656 IGSF3O75054 1194 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■□□□□ 9
VPS26A-205ENST00000489656 IL25Q9H293 177 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 PIH1D3Q9NQM4 214 aaKnown RBP17.09■□□□□ 0.33
VPS26A-205ENST00000489656 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
VPS26A-205ENST00000489656 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
VPS26A-205ENST00000489656 DPEP1P16444 411 aa17.08■□□□□ 0.32
VPS26A-205ENST00000489656 DPP8Q6V1X1 898 aaPredicted RBP17.08■□□□□ 0.32
VPS26A-205ENST00000489656 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
VPS26A-205ENST00000489656 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
VPS26A-205ENST00000489656 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
VPS26A-205ENST00000489656 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
VPS26A-205ENST00000489656 IL1R1P14778 569 aa17.07■□□□□ 0.32
VPS26A-205ENST00000489656 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
VPS26A-205ENST00000489656 SCN9AQ15858 1988 aa17.07■□□□□ 0.32
VPS26A-205ENST00000489656 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
VPS26A-205ENST00000489656 ADD2P35612 726 aa17.06■□□□□ 0.32
VPS26A-205ENST00000489656 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
VPS26A-205ENST00000489656 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-205ENST00000489656 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
VPS26A-205ENST00000489656 EYA3Q99504 573 aa17.06■□□□□ 0.32
VPS26A-205ENST00000489656 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
VPS26A-205ENST00000489656 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 APPBP2Q92624 585 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-205ENST00000489656 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
VPS26A-205ENST00000489656 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-205ENST00000489656 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 PDE6AP16499 860 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
VPS26A-205ENST00000489656 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 ZC3H12CQ9C0D7 883 aaKnown RBP17.04■□□□□ 0.32
VPS26A-205ENST00000489656 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 SPON1Q9HCB6 807 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
VPS26A-205ENST00000489656 MAST3O60307 1309 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-205ENST00000489656 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
VPS26A-205ENST00000489656 CHGBP05060 677 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
VPS26A-205ENST00000489656 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-205ENST00000489656 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
VPS26A-205ENST00000489656 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.32
VPS26A-205ENST00000489656 MCCP23508 829 aa17.02■□□□□ 0.32
VPS26A-205ENST00000489656 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
VPS26A-205ENST00000489656 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
VPS26A-205ENST00000489656 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
VPS26A-205ENST00000489656 PSMD1Q99460 953 aa17.02■□□□□ 0.32
VPS26A-205ENST00000489656 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
VPS26A-205ENST00000489656 FOCADQ5VW36 1801 aa17.02■□□□□ 0.31
VPS26A-205ENST00000489656 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
VPS26A-205ENST00000489656 C21orf2O43822 256 aa17.01■□□□□ 0.31
VPS26A-205ENST00000489656 HSPA4P34932 840 aa17.01■□□□□ 0.31
VPS26A-205ENST00000489656 ANAPC15P60006 121 aa17.01■□□□□ 0.31
VPS26A-205ENST00000489656 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-205ENST00000489656 ECM29Q5VYK3 1845 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 M0R2C6 588 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 PTH1RQ03431 593 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms