RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZBTB40Q9NUA8 1239 aa21.48■■□□□ 1.03
MDC1-206ENST00000489540 TFCP2Q12800 502 aa21.47■■□□□ 1.03
MDC1-206ENST00000489540 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
MDC1-206ENST00000489540 CDC37L1Q7L3B6 337 aa21.47■■□□□ 1.03
MDC1-206ENST00000489540 KIAA0825Q8IV33 1275 aa21.47■■□□□ 1.03
MDC1-206ENST00000489540 ADAMTSL1Q8N6G6 1762 aa21.47■■□□□ 1.03
MDC1-206ENST00000489540 SURF6O75683 361 aaKnown RBP21.46■■□□□ 1.03
MDC1-206ENST00000489540 SCARF1Q14162 830 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 CERS5Q8N5B7 392 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 DCPSQ96C86 337 aaKnown RBP21.46■■□□□ 1.03
MDC1-206ENST00000489540 GNL3LQ9NVN8 582 aaKnown RBP21.46■■□□□ 1.03
MDC1-206ENST00000489540 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
MDC1-206ENST00000489540 MFSD14BQ5SR56 506 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 RPAP2Q8IXW5 612 aaPredicted RBP21.46■■□□□ 1.03
MDC1-206ENST00000489540 TBC1D22AQ8WUA7 517 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 JAG2Q9Y219 1238 aa21.46■■□□□ 1.03
MDC1-206ENST00000489540 A0A1B0GUL6 1792 aa21.45■■□□□ 1.02
MDC1-206ENST00000489540 TIMM10P62072 90 aa21.45■■□□□ 1.02
MDC1-206ENST00000489540 OS9Q13438 667 aaPredicted RBP21.45■■□□□ 1.02
MDC1-206ENST00000489540 CREBZFQ9NS37 354 aa21.45■■□□□ 1.02
MDC1-206ENST00000489540 IQSEC3Q9UPP2 1182 aaPredicted RBP21.45■■□□□ 1.02
MDC1-206ENST00000489540 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
MDC1-206ENST00000489540 GLIS2Q9BZE0 524 aaPredicted RBP21.44■■□□□ 1.02
MDC1-206ENST00000489540 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
MDC1-206ENST00000489540 ZBTB22O15209 634 aa21.43■■□□□ 1.02
MDC1-206ENST00000489540 CHAF1AQ13111 956 aaPredicted RBP21.43■■□□□ 1.02
MDC1-206ENST00000489540 KRT26Q7Z3Y9 468 aa21.43■■□□□ 1.02
MDC1-206ENST00000489540 USP48Q86UV5 1035 aa21.43■■□□□ 1.02
MDC1-206ENST00000489540 F8W031 263 aaPredicted RBP21.42■■□□□ 1.02
MDC1-206ENST00000489540 WNT10BO00744 389 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 SEMA3EO15041 775 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 HMMRO75330 724 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 HTRA3P83110 453 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 GPR108Q9NPR9 543 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 GGA3Q9NZ52 723 aa21.42■■□□□ 1.02
MDC1-206ENST00000489540 TRAF5O00463 557 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
MDC1-206ENST00000489540 DLGAP5Q15398 846 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 NBPF9Q3BBW0 867 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 ANGEL2Q5VTE6 544 aaKnown RBP21.41■■□□□ 1.02
MDC1-206ENST00000489540 CCDC102BQ68D86 513 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 MTMR14Q8NCE2 650 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 NEUROD6Q96NK8 337 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 SUGT1Q9Y2Z0 365 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 PSME4Q14997 1843 aa21.41■■□□□ 1.02
MDC1-206ENST00000489540 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
MDC1-206ENST00000489540 ADORA1P30542 326 aa21.4■■□□□ 1.02
MDC1-206ENST00000489540 HSP90AB4PQ58FF6 505 aa21.4■■□□□ 1.02
MDC1-206ENST00000489540 DNAJC5GQ8N7S2 189 aa21.4■■□□□ 1.02
MDC1-206ENST00000489540 DENND2AQ9ULE3 1009 aa21.4■■□□□ 1.02
MDC1-206ENST00000489540 TTF2Q9UNY4 1162 aaKnown RBP21.4■■□□□ 1.02
MDC1-206ENST00000489540 ASTN2O75129 1339 aaPredicted RBP21.4■■□□□ 1.02
MDC1-206ENST00000489540 PHKA1P46020 1223 aa21.39■■□□□ 1.02
MDC1-206ENST00000489540 GORABQ5T7V8 394 aa21.39■■□□□ 1.02
MDC1-206ENST00000489540 ERC1Q8IUD2 1116 aa21.39■■□□□ 1.02
MDC1-206ENST00000489540 ZBED3Q96IU2 234 aaPredicted RBP21.39■■□□□ 1.02
MDC1-206ENST00000489540 SERPINA10Q9UK55 444 aa21.39■■□□□ 1.02
MDC1-206ENST00000489540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.39■■□□□ 1.02
MDC1-206ENST00000489540 FMR1Q06787 632 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■■■□□ 15.9
MDC1-206ENST00000489540 CFAP100Q494V2 611 aa21.38■■□□□ 1.01
MDC1-206ENST00000489540 MRIQ9BWK5 157 aa21.38■■□□□ 1.01
MDC1-206ENST00000489540 CST9Q5W186 159 aa21.38■■□□□ 1.01
MDC1-206ENST00000489540 MYO1BO43795 1136 aa21.37■■□□□ 1.01
MDC1-206ENST00000489540 CELF2O95319 508 aaKnown RBP21.37■■□□□ 1.01
MDC1-206ENST00000489540 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
MDC1-206ENST00000489540 HDLBPQ00341 1268 aaKnown RBP21.37■■□□□ 1.01
MDC1-206ENST00000489540 TNNI3KQ59H18 835 aa21.37■■□□□ 1.01
MDC1-206ENST00000489540 SIRT2Q8IXJ6 389 aa21.37■■□□□ 1.01
MDC1-206ENST00000489540 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
MDC1-206ENST00000489540 FPGT-TNNI3KV9GXZ4 949 aa21.37■■□□□ 1.01
MDC1-206ENST00000489540 SPDYE2BA6NHP3 402 aa21.36■■□□□ 1.01
MDC1-206ENST00000489540 ADM5C9JUS6 153 aa21.36■■□□□ 1.01
MDC1-206ENST00000489540 SPDYE6P0CI01 402 aa21.36■■□□□ 1.01
MDC1-206ENST00000489540 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
MDC1-206ENST00000489540 MAST3O60307 1309 aa21.35■■□□□ 1.01
MDC1-206ENST00000489540 GRIK5Q16478 980 aa21.35■■□□□ 1.01
MDC1-206ENST00000489540 APOBEC3FQ8IUX4 373 aaKnown RBP21.35■■□□□ 1.01
MDC1-206ENST00000489540 PRMT6Q96LA8 375 aaPredicted RBP21.35■■□□□ 1.01
MDC1-206ENST00000489540 ABT1Q9ULW3 272 aaKnown RBP21.35■■□□□ 1.01
MDC1-206ENST00000489540 PDS5AQ29RF7 1337 aaKnown RBP21.34■■□□□ 1.01
MDC1-206ENST00000489540 SALL1Q9NSC2 1324 aa21.34■■□□□ 1.01
MDC1-206ENST00000489540 CRKP46108 304 aa21.34■■□□□ 1.01
MDC1-206ENST00000489540 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
MDC1-206ENST00000489540 ZNF408Q9H9D4 720 aa21.34■■□□□ 1.01
MDC1-206ENST00000489540 RAB11FIP3O75154 756 aa21.33■■□□□ 1.01
MDC1-206ENST00000489540 UQCRFS1P1P0C7P4 283 aa21.33■■□□□ 1.01
MDC1-206ENST00000489540 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
MDC1-206ENST00000489540 CCDC158Q5M9N0 1113 aa21.33■■□□□ 1.01
MDC1-206ENST00000489540 TEKT1Q969V4 418 aa21.33■■□□□ 1.01
MDC1-206ENST00000489540 ZNF646O15015 1829 aaPredicted RBP21.33■■□□□ 1
MDC1-206ENST00000489540 DEFB115Q30KQ5 88 aa21.32■■□□□ 1
MDC1-206ENST00000489540 DLK2Q6UY11 383 aa21.32■■□□□ 1
MDC1-206ENST00000489540 CDCA5Q96FF9 252 aa21.32■■□□□ 1
MDC1-206ENST00000489540 PCDHAC2Q9Y5I4 1007 aa21.32■■□□□ 1
MDC1-206ENST00000489540 TLL2Q9Y6L7 1015 aa21.32■■□□□ 1
MDC1-206ENST00000489540 RASSF10A6NK89 507 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms