RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 DCCP43146 1447 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 TTC21BQ7Z4L5 1316 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 COL3A1P02461 1466 aaPredicted RBP10.31□□□□□ -0.76
SMC6-209ENST00000489535 CRYBG1Q9Y4K1 1723 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 SCNN1DP51172 638 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 ZNF295-AS1Q8N0V1 137 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
SMC6-209ENST00000489535 PHRF1Q9P1Y6 1649 aaKnown RBP10.31□□□□□ -0.76
SMC6-209ENST00000489535 OVOS2A0A0J9YW53 1432 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 OVOS2Q6IE36 1432 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 TTC21AQ8NDW8 1320 aa10.31□□□□□ -0.76
SMC6-209ENST00000489535 C1orf167Q5SNV9 1468 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 INSRP06213 1382 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 EFSO43281 561 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 MTHFSP49914 203 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 USP4Q13107 963 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
SMC6-209ENST00000489535 COG3Q96JB2 828 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 MST1RQ04912 1400 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 ZBED9Q6R2W3 1325 aa10.3□□□□□ -0.76
SMC6-209ENST00000489535 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 MSH6P52701 1360 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 NACC1Q96RE7 527 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 ZIC5Q96T25 663 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 SMG6Q86US8 1419 aaKnown RBP10.29□□□□□ -0.76
SMC6-209ENST00000489535 RGPD1P0DJD0 1748 aa10.29□□□□□ -0.76
SMC6-209ENST00000489535 ZNF335Q9H4Z2 1342 aaPredicted RBP10.29□□□□□ -0.76
SMC6-209ENST00000489535 INHAP05111 366 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 ALAS2P22557 587 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
SMC6-209ENST00000489535 PRDM6Q9NQX0 595 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
SMC6-209ENST00000489535 CDK12Q9NYV4 1490 aaPredicted RBP10.28□□□□□ -0.76
SMC6-209ENST00000489535 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
SMC6-209ENST00000489535 ABCA3Q99758 1704 aa10.27□□□□□ -0.76
SMC6-209ENST00000489535 HYAL3O43820 417 aaPredicted RBP10.27□□□□□ -0.77
SMC6-209ENST00000489535 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
SMC6-209ENST00000489535 H2AFB2P0C5Z0 115 aa10.27□□□□□ -0.77
SMC6-209ENST00000489535 ATF3P18847 181 aa10.27□□□□□ -0.77
SMC6-209ENST00000489535 SYT9Q86SS6 491 aa10.27□□□□□ -0.77
SMC6-209ENST00000489535 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 M0R082 166 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 GDF10P55107 478 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 GRIK4Q16099 956 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 LCE1DQ5T752 114 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
SMC6-209ENST00000489535 ZDHHC3Q9NYG2 299 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 NDUFB9Q9Y6M9 179 aa10.26□□□□□ -0.77
SMC6-209ENST00000489535 ADARB2-AS1A8MUL3 147 aa10.25□□□□□ -0.77
SMC6-209ENST00000489535 SOCS7O14512 581 aa10.25□□□□□ -0.77
SMC6-209ENST00000489535 FBLN1P23142 703 aa10.25□□□□□ -0.77
SMC6-209ENST00000489535 SMTNP53814 917 aa10.25□□□□□ -0.77
SMC6-209ENST00000489535 TRIM28Q13263 835 aaKnown RBP10.25□□□□□ -0.77
SMC6-209ENST00000489535 SLIT3O75094 1523 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 NFAT5O94916 1531 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
SMC6-209ENST00000489535 PSME1Q06323 249 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 C8orf86Q6ZUL3 223 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 IQSEC3Q9UPP2 1182 aaPredicted RBP10.24□□□□□ -0.77
SMC6-209ENST00000489535 LTBP4Q8N2S1 1624 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 ROBO1Q9Y6N7 1651 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 PNPLA6Q8IY17 1366 aa10.24□□□□□ -0.77
SMC6-209ENST00000489535 IQSEC2Q5JU85 1478 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 PPM1GO15355 546 aaPredicted RBP10.23□□□□□ -0.77
SMC6-209ENST00000489535 SIN3BO75182 1162 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 ALBP02768 609 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 NID1P14543 1247 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
SMC6-209ENST00000489535 ABTB2Q8N961 1025 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
SMC6-209ENST00000489535 FOXO3O43524 673 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
SMC6-209ENST00000489535 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 NUTM2GQ5VZR2 741 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 GJA3Q9Y6H8 435 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 USP3Q9Y6I4 520 aa10.22□□□□□ -0.77
SMC6-209ENST00000489535 FAM208AQ9UK61 1670 aaKnown RBP10.22□□□□□ -0.77
SMC6-209ENST00000489535 COL18A1P39060 1754 aa10.21□□□□□ -0.77
SMC6-209ENST00000489535 U2SURPO15042 1029 aaKnown RBP10.21□□□□□ -0.77
SMC6-209ENST00000489535 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.77
SMC6-209ENST00000489535 KRT28Q7Z3Y7 464 aa10.21□□□□□ -0.77
SMC6-209ENST00000489535 PXDNQ92626 1479 aa10.21□□□□□ -0.78
SMC6-209ENST00000489535 MED1Q15648 1581 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms