RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C7orf43Q8WVR3 580 aa25.2■■□□□ 1.62
SND1-214ENST00000489417 ANO2Q9NQ90 1003 aa25.2■■□□□ 1.62
SND1-214ENST00000489417 ZNF219Q9P2Y4 722 aaPredicted RBP25.19■■□□□ 1.62
SND1-214ENST00000489417 CHGBP05060 677 aa25.18■■□□□ 1.62
SND1-214ENST00000489417 WASHC4Q2M389 1173 aa25.18■■□□□ 1.62
SND1-214ENST00000489417 ZMYM1Q5SVZ6 1142 aa25.18■■□□□ 1.62
SND1-214ENST00000489417 CD2APQ9Y5K6 639 aa25.18■■□□□ 1.62
SND1-214ENST00000489417 DOCK2Q92608 1830 aa25.17■■□□□ 1.62
SND1-214ENST00000489417 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
SND1-214ENST00000489417 RBM25P49756 843 aaKnown RBP25.17■■□□□ 1.62
SND1-214ENST00000489417 KIAA1211Q6ZU35 1233 aa25.17■■□□□ 1.62
SND1-214ENST00000489417 TDRD7Q8NHU6 1098 aaKnown RBP25.17■■□□□ 1.62
SND1-214ENST00000489417 HELLSQ9NRZ9 838 aa25.17■■□□□ 1.62
SND1-214ENST00000489417 EPB41L2O43491 1005 aaKnown RBP25.16■■□□□ 1.62
SND1-214ENST00000489417 MCMDC2Q4G0Z9 681 aa25.16■■□□□ 1.62
SND1-214ENST00000489417 EYA3Q99504 573 aa25.16■■□□□ 1.62
SND1-214ENST00000489417 CD209Q9NNX6 404 aa25.16■■□□□ 1.62
SND1-214ENST00000489417 MYH13Q9UKX3 1938 aa25.16■■□□□ 1.62
SND1-214ENST00000489417 ADD2P35612 726 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 MAP3K12Q12852 859 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 SLFNL1Q499Z3 407 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 LSG1Q9H089 658 aaKnown RBP25.15■■□□□ 1.62
SND1-214ENST00000489417 SPON1Q9HCB6 807 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 PPP1R1BQ9UD71 204 aaPredicted RBP25.15■■□□□ 1.62
SND1-214ENST00000489417 MYH7P12883 1935 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 SNED1Q8TER0 1413 aa25.15■■□□□ 1.62
SND1-214ENST00000489417 C21orf2O43822 256 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 IL1R1P14778 569 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.62
SND1-214ENST00000489417 GRIPAP1Q4V328 841 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 KLHL34Q8N239 644 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 APPBP2Q92624 585 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 SEC62Q99442 399 aaKnown RBP25.14■■□□□ 1.62
SND1-214ENST00000489417 RTFDC1Q9BY42 306 aaPredicted RBP25.14■■□□□ 1.62
SND1-214ENST00000489417 ZC3H12CQ9C0D7 883 aaKnown RBP25.14■■□□□ 1.62
SND1-214ENST00000489417 PIM2Q9P1W9 311 aa25.14■■□□□ 1.62
SND1-214ENST00000489417 RIMBP2O15034 1052 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 PDE6AP16499 860 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 ANP32AP39687 249 aaKnown RBP25.13■■□□□ 1.61
SND1-214ENST00000489417 UBE3CQ15386 1083 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 SLC9C2Q5TAH2 1124 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 ZNF589Q86UQ0 364 aaPredicted RBP25.13■■□□□ 1.61
SND1-214ENST00000489417 LRP2BPQ9P2M1 347 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 WWC3Q9ULE0 1092 aa25.13■■□□□ 1.61
SND1-214ENST00000489417 CCDC93Q567U6 631 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 COA1Q9GZY4 146 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 ABCF2Q9UG63 623 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 MAST3O60307 1309 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 MYO5AQ9Y4I1 1855 aaKnown RBP25.12■■□□□ 1.61
SND1-214ENST00000489417 CCDC129Q6ZRS4 1044 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 SUPT20HQ8NEM7 779 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 OSBP2Q969R2 916 aa25.12■■□□□ 1.61
SND1-214ENST00000489417 CCDC171Q6TFL3 1326 aa25.11■■□□□ 1.61
SND1-214ENST00000489417 MCCP23508 829 aa25.11■■□□□ 1.61
SND1-214ENST00000489417 PTH1RQ03431 593 aa25.11■■□□□ 1.61
SND1-214ENST00000489417 WDR66Q8TBY9 1149 aa25.11■■□□□ 1.61
SND1-214ENST00000489417 ZNF532Q9HCE3 1301 aa25.11■■□□□ 1.61
SND1-214ENST00000489417 TCRBV5S4A2TA0A5A2 114 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 M0R2C6 588 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 RTKN2Q8IZC4 609 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 MAGEB6Q8N7X4 407 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 SALL1Q9NSC2 1324 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 RAI14Q9P0K7 980 aa25.1■■□□□ 1.61
SND1-214ENST00000489417 DALRD3Q5D0E6 543 aaKnown RBP25.09■■□□□ 1.61
SND1-214ENST00000489417 SOGA3Q5TF21 947 aa25.09■■□□□ 1.61
SND1-214ENST00000489417 ERICH6Q7L0X2 663 aa25.09■■□□□ 1.61
SND1-214ENST00000489417 ZGPATQ8N5A5 531 aaKnown RBP25.09■■□□□ 1.61
SND1-214ENST00000489417 JAG2Q9Y219 1238 aa25.09■■□□□ 1.61
SND1-214ENST00000489417 BRCA1P38398 1863 aaKnown RBP25.07■■□□□ 1.6
SND1-214ENST00000489417 SPTY2D1Q68D10 685 aaPredicted RBP25.07■■□□□ 1.6
SND1-214ENST00000489417 PUS7LQ9H0K6 701 aaKnown RBP25.07■■□□□ 1.6
SND1-214ENST00000489417 FAM205AQ6ZU69 1335 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 G3V3G9 751 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 IGSF3O75054 1194 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 HSPA4P34932 840 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 DOK7Q18PE1 504 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 DCAF8Q5TAQ9 597 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 MAP4K1Q92918 833 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 MAST2Q6P0Q8 1798 aa25.06■■□□□ 1.6
SND1-214ENST00000489417 PSMD1Q99460 953 aa25.05■■□□□ 1.6
SND1-214ENST00000489417 CYP7A1P22680 504 aa25.04■■□□□ 1.6
SND1-214ENST00000489417 KIAA2012Q0VF49 1180 aa25.04■■□□□ 1.6
SND1-214ENST00000489417 NAA16Q6N069 864 aaPredicted RBP25.04■■□□□ 1.6
SND1-214ENST00000489417 TMED8Q6PL24 325 aaPredicted RBP25.04■■□□□ 1.6
SND1-214ENST00000489417 KIF2CQ99661 725 aa25.04■■□□□ 1.6
SND1-214ENST00000489417 RBM8AQ9Y5S9 174 aaKnown RBP25.04■■□□□ 1.6
SND1-214ENST00000489417 GPAA1O43292 621 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 PRDX5P30044 214 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 TBC1D22AQ8WUA7 517 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 DSCC1Q9BVC3 393 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 LDHBP07195 334 aaKnown RBP25.03■■□□□ 1.6
SND1-214ENST00000489417 ANAPC15P60006 121 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 MECOMQ03112 1051 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 AOC3Q16853 763 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 PODNQ7Z5L7 613 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 NLGN2Q8NFZ4 835 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 NSUN4Q96CB9 384 aaKnown RBP25.03■■□□□ 1.6
SND1-214ENST00000489417 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
SND1-214ENST00000489417 GTF2IP78347 998 aa25.02■■□□□ 1.6
SND1-214ENST00000489417 DZIP1Q86YF9 867 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms