RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 RAPGEFL1Q9UHV5 662 aa19.81■□□□□ 0.76
UFD1-209ENST00000489406 RIPOR2Q9Y4F9 1068 aa19.81■□□□□ 0.76
UFD1-209ENST00000489406 PPP2R3BQ9Y5P8 575 aa19.81■□□□□ 0.76
UFD1-209ENST00000489406 WDHD1O75717 1129 aaPredicted RBP19.8■□□□□ 0.76
UFD1-209ENST00000489406 GTF2A2P52657 109 aa19.8■□□□□ 0.76
UFD1-209ENST00000489406 DLGAP5Q15398 846 aa19.8■□□□□ 0.76
UFD1-209ENST00000489406 ISCA1Q9BUE6 129 aa19.8■□□□□ 0.76
UFD1-209ENST00000489406 SRRDQ9UH36 339 aa19.8■□□□□ 0.76
UFD1-209ENST00000489406 CTGFP29279 349 aa19.79■□□□□ 0.76
UFD1-209ENST00000489406 TRIM47Q96LD4 638 aa19.79■□□□□ 0.76
UFD1-209ENST00000489406 ZMYND8Q9ULU4 1186 aaPredicted RBP19.79■□□□□ 0.76
UFD1-209ENST00000489406 CLRN2A0PK11 232 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 SGPL1O95470 568 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 UBXN2AP68543 259 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 TTLL5Q6EMB2 1281 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 CCDC85AQ96PX6 553 aaPredicted RBP19.78■□□□□ 0.76
UFD1-209ENST00000489406 PCDHAC2Q9Y5I4 1007 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
UFD1-209ENST00000489406 ZNF804BA4D1E1 1349 aa19.77■□□□□ 0.76
UFD1-209ENST00000489406 OSBPP22059 807 aa19.77■□□□□ 0.76
UFD1-209ENST00000489406 PSMC4P43686 418 aa19.77■□□□□ 0.76
UFD1-209ENST00000489406 TDHQ8IZJ6 230 aa19.77■□□□□ 0.76
UFD1-209ENST00000489406 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
UFD1-209ENST00000489406 GUCD1Q96NT3 240 aa19.76■□□□□ 0.75
UFD1-209ENST00000489406 VEZTQ9HBM0 779 aa19.76■□□□□ 0.75
UFD1-209ENST00000489406 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
UFD1-209ENST00000489406 FMNL1O95466 1100 aaPredicted RBP19.75■□□□□ 0.75
UFD1-209ENST00000489406 TFRCP02786 760 aaKnown RBP19.75■□□□□ 0.75
UFD1-209ENST00000489406 HOXD10P28358 340 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 C7orf61Q8IZ16 206 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 PLBD2Q8NHP8 589 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 COA1Q9GZY4 146 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 TTC28Q96AY4 2481 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 MYPNQ86TC9 1320 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 IRS2Q9Y4H2 1338 aa19.75■□□□□ 0.75
UFD1-209ENST00000489406 OTOFQ9HC10 1997 aa19.74■□□□□ 0.75
UFD1-209ENST00000489406 CCDC152Q4G0S7 254 aa19.74■□□□□ 0.75
UFD1-209ENST00000489406 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.74■□□□□ 0.75
UFD1-209ENST00000489406 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
UFD1-209ENST00000489406 PAWRQ96IZ0 340 aaKnown RBP19.74■□□□□ 0.75
UFD1-209ENST00000489406 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 GTF2IP78347 998 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 RASA3Q14644 834 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 FAM161BQ96MY7 647 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 CPA4Q9UI42 421 aa19.73■□□□□ 0.75
UFD1-209ENST00000489406 ALPK3Q96L96 1907 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 BTBD19C9JJ37 291 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 MYO1BO43795 1136 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 SYN1P17600 705 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 PLA2G5P39877 138 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 MAGEA10P43363 369 aaPredicted RBP19.72■□□□□ 0.75
UFD1-209ENST00000489406 C17orf99Q6UX52 265 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 MTMR14Q8NCE2 650 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 AOX1Q06278 1338 aa19.72■□□□□ 0.75
UFD1-209ENST00000489406 VGLL4Q14135 290 aa19.71■□□□□ 0.75
UFD1-209ENST00000489406 HELBQ8NG08 1087 aaPredicted RBP19.71■□□□□ 0.75
UFD1-209ENST00000489406 PRMT6Q96LA8 375 aaPredicted RBP19.71■□□□□ 0.75
UFD1-209ENST00000489406 DEFB118Q96PH6 123 aa19.71■□□□□ 0.75
UFD1-209ENST00000489406 UBE2OQ9C0C9 1292 aaKnown RBP19.71■□□□□ 0.75
UFD1-209ENST00000489406 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
UFD1-209ENST00000489406 CETPP11597 493 aa19.7■□□□□ 0.74
UFD1-209ENST00000489406 CCT4P50991 539 aaKnown RBP19.7■□□□□ 0.74
UFD1-209ENST00000489406 CFAP100Q494V2 611 aa19.7■□□□□ 0.74
UFD1-209ENST00000489406 NEFMP07197 916 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 MAP3K9P80192 1104 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 PRKCZQ05513 592 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 ZBTB38Q8NAP3 1195 aaPredicted RBP19.69■□□□□ 0.74
UFD1-209ENST00000489406 FAM122AQ96E09 287 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 ZCCHC17Q9NP64 241 aaKnown RBP19.69■□□□□ 0.74
UFD1-209ENST00000489406 MINPP1Q9UNW1 487 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 EYSQ5T1H1 3165 aa19.69■□□□□ 0.74
UFD1-209ENST00000489406 SPDYE2BA6NHP3 402 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 F8W031 263 aaPredicted RBP19.68■□□□□ 0.74
UFD1-209ENST00000489406 POTEB2H3BUK9 544 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 SPDYE6P0CI01 402 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 HSP90B1P14625 803 aaKnown RBP19.68■□□□□ 0.74
UFD1-209ENST00000489406 NECAB2Q7Z6G3 386 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 CERS5Q8N5B7 392 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 SLAIN1Q8ND83 568 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 DIS3LQ8TF46 1054 aaKnown RBP19.68■□□□□ 0.74
UFD1-209ENST00000489406 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
UFD1-209ENST00000489406 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 CSADQ9Y600 493 aa19.68■□□□□ 0.74
UFD1-209ENST00000489406 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
UFD1-209ENST00000489406 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
UFD1-209ENST00000489406 FAM109BQ6ICB4 259 aaPredicted RBP19.67■□□□□ 0.74
UFD1-209ENST00000489406 CDAN1Q8IWY9 1227 aa19.67■□□□□ 0.74
UFD1-209ENST00000489406 SYMPKQ92797 1274 aaKnown RBP19.67■□□□□ 0.74
UFD1-209ENST00000489406 PDE8AO60658 829 aa19.66■□□□□ 0.74
UFD1-209ENST00000489406 KLRK1P26718 216 aa19.66■□□□□ 0.74
UFD1-209ENST00000489406 NFE2L2Q16236 605 aa19.66■□□□□ 0.74
UFD1-209ENST00000489406 SPDYE5A6NIY4 337 aa19.65■□□□□ 0.74
UFD1-209ENST00000489406 CAPN2P17655 700 aa19.65■□□□□ 0.74
UFD1-209ENST00000489406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.74
UFD1-209ENST00000489406 GABRQQ9UN88 632 aa19.65■□□□□ 0.74
UFD1-209ENST00000489406 ADCY3O60266 1144 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 INHAP05111 366 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 ELNP15502 786 aa19.64■□□□□ 0.73
UFD1-209ENST00000489406 RBM5P52756 815 aaKnown RBP eCLIP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms