RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ABCF2Q9UG63 623 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 MAST3O60307 1309 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.48
USP11-211ENST00000489111 ADD2P35612 726 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 ANAPC15P60006 121 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 RABEP1Q15276 862 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 CC2D2BQ6DHV5 1058 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
USP11-211ENST00000489111 MAGEB6Q8N7X4 407 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.49
USP11-211ENST00000489111 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
USP11-211ENST00000489111 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.49
USP11-211ENST00000489111 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 ZNF532Q9HCE3 1301 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
USP11-211ENST00000489111 G3V3G9 751 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 M0R2C6 588 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 ZBTB22O15209 634 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 CHGBP05060 677 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 DPEP1P16444 411 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 HSPA4P34932 840 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 TGFB2P61812 414 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 PTH1RQ03431 593 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 SPTY2D1Q68D10 685 aaPredicted RBP12.01□□□□□ -0.49
USP11-211ENST00000489111 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
USP11-211ENST00000489111 WDR66Q8TBY9 1149 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 OSBP2Q969R2 916 aa12.01□□□□□ -0.49
USP11-211ENST00000489111 ZC3H12CQ9C0D7 883 aaKnown RBP12.01□□□□□ -0.49
USP11-211ENST00000489111 RBM8AQ9Y5S9 174 aaKnown RBP12.01□□□□□ -0.49
USP11-211ENST00000489111 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
USP11-211ENST00000489111 TAF1P21675 1872 aa12□□□□□ -0.49
USP11-211ENST00000489111 A0A0G2JLW4 131 aa12□□□□□ -0.49
USP11-211ENST00000489111 RIMBP2O15034 1052 aa12□□□□□ -0.49
USP11-211ENST00000489111 ZKSCAN1P17029 563 aaPredicted RBP12□□□□□ -0.49
USP11-211ENST00000489111 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
USP11-211ENST00000489111 CCDC93Q567U6 631 aa12□□□□□ -0.49
USP11-211ENST00000489111 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
USP11-211ENST00000489111 HSCBQ8IWL3 235 aa12□□□□□ -0.49
USP11-211ENST00000489111 SUPT20HQ8NEM7 779 aa12□□□□□ -0.49
USP11-211ENST00000489111 AIDAQ96BJ3 306 aa12□□□□□ -0.49
USP11-211ENST00000489111 COA1Q9GZY4 146 aa12□□□□□ -0.49
USP11-211ENST00000489111 CD209Q9NNX6 404 aa12□□□□□ -0.49
USP11-211ENST00000489111 GPAA1O43292 621 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 C21orf2O43822 256 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 IL1R1P14778 569 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 CYP7A1P22680 504 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 NAA16Q6N069 864 aaPredicted RBP11.99□□□□□ -0.49
USP11-211ENST00000489111 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
USP11-211ENST00000489111 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
USP11-211ENST00000489111 MAP4K1Q92918 833 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 KIF2CQ99661 725 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
USP11-211ENST00000489111 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
USP11-211ENST00000489111 AK9Q5TCS8 1911 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 TCRBV5S4A2TA0A5A2 114 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 ST18O60284 1047 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 IGSF3O75054 1194 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 MBD4O95243 580 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
USP11-211ENST00000489111 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 C7orf43Q8WVR3 580 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 PALD1Q9ULE6 856 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 CD2APQ9Y5K6 639 aa11.98□□□□□ -0.49
USP11-211ENST00000489111 SLC27A2O14975 620 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 GSTO1P78417 241 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
USP11-211ENST00000489111 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
USP11-211ENST00000489111 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
USP11-211ENST00000489111 MAGEB6P1A0A0J9YX57 407 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 APPP05067 770 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 HSPD1P10809 573 aaKnown RBP11.96□□□□□ -0.49
USP11-211ENST00000489111 GNAT2P19087 354 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 KCNA3P22001 575 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 PRDX5P30044 214 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 PTGER2P43116 358 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 MECOMQ03112 1051 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 KRT32Q14532 448 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 NECTIN1Q15223 517 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms