RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PI16Q6UXB8 463 aa19.45■□□□□ 0.7
CLDN11-208ENST00000488989 KBTBD3Q8NAB2 608 aa19.45■□□□□ 0.7
CLDN11-208ENST00000488989 EDC3Q96F86 508 aaKnown RBP19.45■□□□□ 0.7
CLDN11-208ENST00000488989 SNRKQ9NRH2 765 aa19.45■□□□□ 0.7
CLDN11-208ENST00000488989 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
CLDN11-208ENST00000488989 SCN9AQ15858 1988 aa19.44■□□□□ 0.7
CLDN11-208ENST00000488989 GOLIM4O00461 696 aa19.44■□□□□ 0.7
CLDN11-208ENST00000488989 TTF1Q15361 905 aaPredicted RBP19.44■□□□□ 0.7
CLDN11-208ENST00000488989 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
CLDN11-208ENST00000488989 RIMBP2O15034 1052 aa19.43■□□□□ 0.7
CLDN11-208ENST00000488989 IQSEC3Q9UPP2 1182 aaPredicted RBP19.43■□□□□ 0.7
CLDN11-208ENST00000488989 FAM205AQ6ZU69 1335 aa19.43■□□□□ 0.7
CLDN11-208ENST00000488989 DICER1Q9UPY3 1922 aaKnown RBP19.43■□□□□ 0.7
CLDN11-208ENST00000488989 SBF1O95248 1867 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 NFKBIEO00221 500 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 IGSF3O75054 1194 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 TBC1D9Q6ZT07 1266 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 PODNQ7Z5L7 613 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 WWC3Q9ULE0 1092 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 SALL1Q9NSC2 1324 aa19.42■□□□□ 0.7
CLDN11-208ENST00000488989 HIP1O00291 1037 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 CHMLP26374 656 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 FSD1Q9BTV5 496 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 TAOK3Q9H2K8 898 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 PIH1D3Q9NQM4 214 aaKnown RBP19.41■□□□□ 0.7
CLDN11-208ENST00000488989 MAST2Q6P0Q8 1798 aa19.41■□□□□ 0.7
CLDN11-208ENST00000488989 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
CLDN11-208ENST00000488989 FRAT2O75474 233 aaPredicted RBP19.4■□□□□ 0.7
CLDN11-208ENST00000488989 AOC3Q16853 763 aa19.4■□□□□ 0.7
CLDN11-208ENST00000488989 WDR66Q8TBY9 1149 aa19.4■□□□□ 0.7
CLDN11-208ENST00000488989 COL4A5P29400 1685 aa19.4■□□□□ 0.7
CLDN11-208ENST00000488989 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
CLDN11-208ENST00000488989 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
CLDN11-208ENST00000488989 ECE2O60344 883 aa19.38■□□□□ 0.69
CLDN11-208ENST00000488989 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
CLDN11-208ENST00000488989 DOK7Q18PE1 504 aa19.38■□□□□ 0.69
CLDN11-208ENST00000488989 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
CLDN11-208ENST00000488989 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
CLDN11-208ENST00000488989 CHAF1AQ13111 956 aaPredicted RBP19.37■□□□□ 0.69
CLDN11-208ENST00000488989 ZSCAN25Q6NSZ9 544 aa19.37■□□□□ 0.69
CLDN11-208ENST00000488989 TMED8Q6PL24 325 aaPredicted RBP19.37■□□□□ 0.69
CLDN11-208ENST00000488989 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
CLDN11-208ENST00000488989 TBC1D22AQ8WUA7 517 aa19.37■□□□□ 0.69
CLDN11-208ENST00000488989 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLDN11-208ENST00000488989 DBNDD1Q9H9R9 158 aa19.37■□□□□ 0.69
CLDN11-208ENST00000488989 G3V3G9 751 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 RNF113AO15541 343 aaKnown RBP19.36■□□□□ 0.69
CLDN11-208ENST00000488989 ADD2P35612 726 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 FKBP1AP62942 108 aaKnown RBP19.36■□□□□ 0.69
CLDN11-208ENST00000488989 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 DCAF8Q5TAQ9 597 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 DIAPH3Q9NSV4 1193 aa19.36■□□□□ 0.69
CLDN11-208ENST00000488989 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 RAD50Q92878 1312 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
CLDN11-208ENST00000488989 GTF2IP78347 998 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 UBE3CQ15386 1083 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 ZMYM1Q5SVZ6 1142 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 SPTY2D1Q68D10 685 aaPredicted RBP19.35■□□□□ 0.69
CLDN11-208ENST00000488989 ESYT1Q9BSJ8 1104 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 SUGT1Q9Y2Z0 365 aa19.35■□□□□ 0.69
CLDN11-208ENST00000488989 TCRBV5S4A2TA0A5A2 114 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 SGSM2O43147 1006 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 IDH1O75874 414 aaKnown RBP19.34■□□□□ 0.69
CLDN11-208ENST00000488989 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLDN11-208ENST00000488989 PRELPP51888 382 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 RASSF7Q02833 373 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 NMIQ13287 307 aaPredicted RBP19.34■□□□□ 0.69
CLDN11-208ENST00000488989 TTLL5Q6EMB2 1281 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 RUFY2Q8WXA3 655 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 ABCF2Q9UG63 623 aa19.34■□□□□ 0.69
CLDN11-208ENST00000488989 PDE6AP16499 860 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 NIM1KQ8IY84 436 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 APPBP2Q92624 585 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 FAM227BQ96M60 508 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 HELLSQ9NRZ9 838 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 ZNRF3Q9ULT6 936 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 JAG2Q9Y219 1238 aa19.33■□□□□ 0.68
CLDN11-208ENST00000488989 GOLGB1Q14789 3259 aaKnown RBP19.33■□□□□ 0.68
CLDN11-208ENST00000488989 A0A0D9SFI3 127 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 SEC24BO95487 1268 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 CHGBP05060 677 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 PRDX5P30044 214 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 MFSD14BQ5SR56 506 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 DACT2Q5SW24 774 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 SLC9C2Q5TAH2 1124 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 CWC27Q6UX04 472 aaKnown RBP19.32■□□□□ 0.68
CLDN11-208ENST00000488989 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 ZNF384Q8TF68 577 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 NSUN4Q96CB9 384 aaKnown RBP19.32■□□□□ 0.68
CLDN11-208ENST00000488989 IL25Q9H293 177 aa19.32■□□□□ 0.68
CLDN11-208ENST00000488989 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms