RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 IGF2BP3O00425 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTCH1-211ENST00000488809 ITGA6P23229 1130 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 FKBP1AP62942 108 aaKnown RBP8.33□□□□□ -1.08
PTCH1-211ENST00000488809 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-211ENST00000488809 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 VEZTQ9HBM0 779 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 CD209Q9NNX6 404 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 SSC5DA1L4H1 1573 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.08
PTCH1-211ENST00000488809 CRHR2Q13324 411 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 SLC4A8Q2Y0W8 1093 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 CFAP100Q494V2 611 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 SLC9C1Q4G0N8 1177 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 UBE3BQ7Z3V4 1068 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 PLA2G12BQ9BX93 195 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 ADAMTS8Q9UP79 889 aa8.32□□□□□ -1.08
PTCH1-211ENST00000488809 AK9Q5TCS8 1911 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 CLRN2A0PK11 232 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 TESPA1A2RU30 521 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 TNNI2P48788 182 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 FXR1P51114 621 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 CHRNDQ07001 517 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 KIF22Q14807 665 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 C15orf52Q6ZUT6 534 aaKnown RBP8.31□□□□□ -1.08
PTCH1-211ENST00000488809 ZNF333Q96JL9 665 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 CLMNQ96JQ2 1002 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 ZFYVE28Q9HCC9 887 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 FZD1Q9UP38 647 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 MYH13Q9UKX3 1938 aa8.31□□□□□ -1.08
PTCH1-211ENST00000488809 WTIPA6NIX2 430 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-211ENST00000488809 F8W031 263 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-211ENST00000488809 H7C1W4 665 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-211ENST00000488809 GNRH1P01148 92 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 IL1R1P14778 569 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 KLRK1P26718 216 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 GTF2A2P52657 109 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
PTCH1-211ENST00000488809 GCKRQ14397 625 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 RASA3Q14644 834 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 NBPF12Q5TAG4 269 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-211ENST00000488809 C8orf58Q8NAV2 365 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 OPTNQ96CV9 577 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 CSADQ9Y600 493 aa8.3□□□□□ -1.08
PTCH1-211ENST00000488809 APAF1O14727 1248 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 CSF1RP07333 972 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 PRMT2P55345 433 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 TAF7LQ5H9L4 462 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 PRMT6Q96LA8 375 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-211ENST00000488809 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 ZCCHC17Q9NP64 241 aaKnown RBP8.29□□□□□ -1.08
PTCH1-211ENST00000488809 SERPINA10Q9UK55 444 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-211ENST00000488809 CHMP3Q9Y3E7 222 aa8.29□□□□□ -1.08
PTCH1-211ENST00000488809 CEP290O15078 2479 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 MGAMO43451 1857 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 CCL15-CCL14A0A0B4J2E2 113 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 SLC4A2P04920 1241 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 GJA5P36382 358 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 FKBP5Q13451 457 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-211ENST00000488809 CCL15Q16663 113 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 CCDC57Q2TAC2 916 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 TWISTNBQ3B726 338 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-211ENST00000488809 SPDYE2Q495Y8 402 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 CERS5Q8N5B7 392 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 LINS1Q8NG48 757 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 PTPN18Q99952 460 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
PTCH1-211ENST00000488809 ZSWIM8A7E2V4 1837 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 TAF5LO75529 589 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 CETPP11597 493 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 MAP3K9P80192 1104 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 FLIIQ13045 1269 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 MFSD14BQ5SR56 506 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 OTUD5Q96G74 571 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 MS4A4AQ96JQ5 239 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 CNNM1Q9NRU3 951 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 TMOD2Q9NZR1 351 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-211ENST00000488809 TTF2Q9UNY4 1162 aaKnown RBP8.27□□□□□ -1.09
PTCH1-211ENST00000488809 FAM205AQ6ZU69 1335 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 IRS2Q9Y4H2 1338 aa8.27□□□□□ -1.09
PTCH1-211ENST00000488809 TRIOBPQ9H2D6 2365 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 TLR2O60603 784 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 HOXD10P28358 340 aa8.26□□□□□ -1.09
PTCH1-211ENST00000488809 DDX10Q13206 875 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms