RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 DPF2Q92785 391 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 MXD3Q9BW11 206 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
PDPN-206ENST00000488631 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 SHTN1A0MZ66 631 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
PDPN-206ENST00000488631 CIAO1O76071 339 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 APLP1P51693 650 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 LPIN2Q92539 896 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
PDPN-206ENST00000488631 ZNF408Q9H9D4 720 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 MYH3P11055 1940 aa12.17□□□□□ -0.46
PDPN-206ENST00000488631 MYO3BQ8WXR4 1341 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
PDPN-206ENST00000488631 BCAMP50895 628 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 ATP8B2P98198 1209 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 TFCP2Q12800 502 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
PDPN-206ENST00000488631 LRRC37AA6NMS7 1700 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 APBB1O00213 710 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 HMMRO75330 724 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 GABBR2O75899 941 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 DACT2Q5SW24 774 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
PDPN-206ENST00000488631 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
PDPN-206ENST00000488631 MYOZ2Q9NPC6 264 aa12.15□□□□□ -0.46
PDPN-206ENST00000488631 DICER1Q9UPY3 1922 aaKnown RBP12.15□□□□□ -0.46
PDPN-206ENST00000488631 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 SASH1O94885 1247 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 SCARF1Q14162 830 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 PDE3AQ14432 1141 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 C20orf194Q5TEA3 1177 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 C15orf52Q6ZUT6 534 aaKnown RBP12.14□□□□□ -0.47
PDPN-206ENST00000488631 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
PDPN-206ENST00000488631 ABT1Q9ULW3 272 aaKnown RBP12.14□□□□□ -0.47
PDPN-206ENST00000488631 IL1R1P14778 569 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 TIMM10P62072 90 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 HTRA3P83110 453 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 MTX1Q13505 466 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 DLGAP5Q15398 846 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
PDPN-206ENST00000488631 GLIS2Q9BZE0 524 aaPredicted RBP12.13□□□□□ -0.47
PDPN-206ENST00000488631 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
PDPN-206ENST00000488631 TRAF5O00463 557 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 MYO1BO43795 1136 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
PDPN-206ENST00000488631 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
PDPN-206ENST00000488631 GRM1Q13255 1194 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 ANGEL2Q5VTE6 544 aaKnown RBP12.12□□□□□ -0.47
PDPN-206ENST00000488631 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 TDRD7Q8NHU6 1098 aaKnown RBP12.12□□□□□ -0.47
PDPN-206ENST00000488631 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
PDPN-206ENST00000488631 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 GGA3Q9NZ52 723 aa12.12□□□□□ -0.47
PDPN-206ENST00000488631 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 ADORA1P30542 326 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 ERC1Q8IUD2 1116 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
PDPN-206ENST00000488631 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 VEZTQ9HBM0 779 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
PDPN-206ENST00000488631 CELF2O95319 508 aaKnown RBP12.1□□□□□ -0.47
PDPN-206ENST00000488631 EGFRP00533 1210 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 FGFR2P21802 821 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 ZNF280AP59817 542 aaPredicted RBP12.1□□□□□ -0.47
PDPN-206ENST00000488631 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
PDPN-206ENST00000488631 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 TTC39AQ5SRH9 613 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
PDPN-206ENST00000488631 ABCF2Q9UG63 623 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
PDPN-206ENST00000488631 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 ITGBL1O95965 494 aaPredicted RBP12.09□□□□□ -0.47
PDPN-206ENST00000488631 PHKA1P46020 1223 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 MMP14P50281 582 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 NBPF9Q3BBW0 867 aa12.09□□□□□ -0.47
PDPN-206ENST00000488631 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms