RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CNTROBQ8N137 903 aa18.62■□□□□ 0.57
CXCL12-207ENST00000488591 MXD3Q9BW11 206 aa18.62■□□□□ 0.57
CXCL12-207ENST00000488591 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
CXCL12-207ENST00000488591 ADAMTSL1Q8N6G6 1762 aa18.61■□□□□ 0.57
CXCL12-207ENST00000488591 FAM205AQ6ZU69 1335 aa18.61■□□□□ 0.57
CXCL12-207ENST00000488591 KIF4BQ2VIQ3 1234 aa18.61■□□□□ 0.57
CXCL12-207ENST00000488591 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
CXCL12-207ENST00000488591 TRPM4Q8TD43 1214 aa18.61■□□□□ 0.57
CXCL12-207ENST00000488591 MYOZ2Q9NPC6 264 aa18.61■□□□□ 0.57
CXCL12-207ENST00000488591 APLP1P51693 650 aa18.6■□□□□ 0.57
CXCL12-207ENST00000488591 HIRAP54198 1017 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-207ENST00000488591 KIAA0825Q8IV33 1275 aa18.6■□□□□ 0.57
CXCL12-207ENST00000488591 PGAP2Q9UHJ9 254 aa18.6■□□□□ 0.57
CXCL12-207ENST00000488591 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-207ENST00000488591 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
CXCL12-207ENST00000488591 TIMM10P62072 90 aa18.59■□□□□ 0.57
CXCL12-207ENST00000488591 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
CXCL12-207ENST00000488591 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
CXCL12-207ENST00000488591 JAG2Q9Y219 1238 aa18.59■□□□□ 0.57
CXCL12-207ENST00000488591 A0A1B0GUL7 405 aa18.58■□□□□ 0.56
CXCL12-207ENST00000488591 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.56
CXCL12-207ENST00000488591 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
CXCL12-207ENST00000488591 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
CXCL12-207ENST00000488591 MFSD14BQ5SR56 506 aa18.58■□□□□ 0.56
CXCL12-207ENST00000488591 DCPSQ96C86 337 aaKnown RBP18.58■□□□□ 0.56
CXCL12-207ENST00000488591 ZNF646O15015 1829 aaPredicted RBP18.58■□□□□ 0.56
CXCL12-207ENST00000488591 EGFRP00533 1210 aa18.57■□□□□ 0.56
CXCL12-207ENST00000488591 GORABQ5T7V8 394 aa18.57■□□□□ 0.56
CXCL12-207ENST00000488591 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
CXCL12-207ENST00000488591 ERC1Q8IUD2 1116 aa18.57■□□□□ 0.56
CXCL12-207ENST00000488591 CERS5Q8N5B7 392 aa18.57■□□□□ 0.56
CXCL12-207ENST00000488591 F8W031 263 aaPredicted RBP18.56■□□□□ 0.56
CXCL12-207ENST00000488591 SEMA3EO15041 775 aa18.56■□□□□ 0.56
CXCL12-207ENST00000488591 SCARF1Q14162 830 aa18.56■□□□□ 0.56
CXCL12-207ENST00000488591 XAGE2Q96GT9 111 aa18.56■□□□□ 0.56
CXCL12-207ENST00000488591 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
CXCL12-207ENST00000488591 PASKQ96RG2 1323 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 ADORA1P30542 326 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 DLGAP5Q15398 846 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 CCDC102BQ68D86 513 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
CXCL12-207ENST00000488591 PHKA1P46020 1223 aa18.54■□□□□ 0.56
CXCL12-207ENST00000488591 TNNI3KQ59H18 835 aa18.54■□□□□ 0.56
CXCL12-207ENST00000488591 TTF2Q9UNY4 1162 aaKnown RBP18.54■□□□□ 0.56
CXCL12-207ENST00000488591 EXOC6BQ9Y2D4 811 aa18.54■□□□□ 0.56
CXCL12-207ENST00000488591 FPGT-TNNI3KV9GXZ4 949 aa18.54■□□□□ 0.56
CXCL12-207ENST00000488591 ARAP2Q8WZ64 1704 aa18.54■□□□□ 0.56
CXCL12-207ENST00000488591 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
CXCL12-207ENST00000488591 SULF1Q8IWU6 871 aa18.53■□□□□ 0.56
CXCL12-207ENST00000488591 SIRT2Q8IXJ6 389 aa18.53■□□□□ 0.56
CXCL12-207ENST00000488591 GLIS2Q9BZE0 524 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-207ENST00000488591 GGA3Q9NZ52 723 aa18.53■□□□□ 0.56
CXCL12-207ENST00000488591 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
CXCL12-207ENST00000488591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-207ENST00000488591 MYH13Q9UKX3 1938 aa18.53■□□□□ 0.56
CXCL12-207ENST00000488591 TMEM88BA6NKF7 163 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 WNT10BO00744 389 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 ZBTB22O15209 634 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.56
CXCL12-207ENST00000488591 KRT26Q7Z3Y9 468 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 USP48Q86UV5 1035 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 CREBZFQ9NS37 354 aa18.52■□□□□ 0.56
CXCL12-207ENST00000488591 MAST3O60307 1309 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 PITPNM2Q9BZ72 1349 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 MYO1BO43795 1136 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 RAB11FIP3O75154 756 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 CFAP100Q494V2 611 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 SERPINA10Q9UK55 444 aa18.51■□□□□ 0.55
CXCL12-207ENST00000488591 TRAF5O00463 557 aa18.5■□□□□ 0.55
CXCL12-207ENST00000488591 UQCRFS1P1P0C7P4 283 aa18.5■□□□□ 0.55
CXCL12-207ENST00000488591 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
CXCL12-207ENST00000488591 KIF1BPQ96EK5 621 aa18.5■□□□□ 0.55
CXCL12-207ENST00000488591 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
CXCL12-207ENST00000488591 ASTN2O75129 1339 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 PDS5AQ29RF7 1337 aaKnown RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 APBB1O00213 710 aa18.49■□□□□ 0.55
CXCL12-207ENST00000488591 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 RASGRF1Q13972 1273 aa18.49■□□□□ 0.55
CXCL12-207ENST00000488591 TTC39AQ5SRH9 613 aa18.49■□□□□ 0.55
CXCL12-207ENST00000488591 RHPN1Q8TCX5 695 aa18.49■□□□□ 0.55
CXCL12-207ENST00000488591 ZBED3Q96IU2 234 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 POLR2AP24928 1970 aaKnown RBP18.49■□□□□ 0.55
CXCL12-207ENST00000488591 SALL1Q9NSC2 1324 aa18.49■□□□□ 0.55
CXCL12-207ENST00000488591 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 LDHBP07195 334 aaKnown RBP18.48■□□□□ 0.55
CXCL12-207ENST00000488591 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 CRKP46108 304 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 AAMPQ13685 434 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
CXCL12-207ENST00000488591 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
CXCL12-207ENST00000488591 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 MRIQ9BWK5 157 aa18.48■□□□□ 0.55
CXCL12-207ENST00000488591 ADM5C9JUS6 153 aa18.47■□□□□ 0.55
CXCL12-207ENST00000488591 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms