RNA–Protein interactions for RNA: ENST00000488180.1

SP100-216, Transcript of SP100 nuclear antigen, human

TSL 2

Gene SP100, Length 3,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP100-216	ENST00000488180	DIAPH1	O60610	1272 aa	Known RBP	4.35	□□□□□ -1.71
SP100-216	ENST00000488180	GYS1	P13807	737 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	SIK1	P57059	783 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	EVX2	Q03828	476 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	FSTL1	Q12841	308 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	SLFNL1	Q499Z3	407 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	MUM1L1	Q5H9M0	696 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	RNF20	Q5VTR2	975 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	BANK1	Q8NDB2	785 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SP100-216	ENST00000488180	INTS4	Q96HW7	963 aa	Known RBP	4.35	□□□□□ -1.71
SP100-216	ENST00000488180	LCMT1	Q9UIC8	334 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	KCNG1	Q9UIX4	513 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	PASK	Q96RG2	1323 aa		4.35	□□□□□ -1.71
SP100-216	ENST00000488180	GNAT3	A8MTJ3	354 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	ERC2	O15083	957 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	CUL4A	Q13619	759 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	ERCC6L	Q2NKX8	1250 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	EP400NL	Q6ZTU2	488 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	LUZP1	Q86V48	1076 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	SIRT2	Q8IXJ6	389 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	FAM200A	Q8TCP9	573 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	DRC1	Q96MC2	740 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	FUCA2	Q9BTY2	467 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	SRCIN1	Q9C0H9	1055 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	TRMT1	Q9NXH9	659 aa	Known RBP	4.34	□□□□□ -1.71
SP100-216	ENST00000488180	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
SP100-216	ENST00000488180	JRKL	Q9Y4A0	524 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	GUCY2C	P25092	1073 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	COL23A1	Q86Y22	540 aa	Predicted RBP	4.34	□□□□□ -1.71
SP100-216	ENST00000488180	CNPY4	Q8N129	248 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	NLGN1	Q8N2Q7	840 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	CACTIN	Q8WUQ7	758 aa	Known RBP	4.34	□□□□□ -1.71
SP100-216	ENST00000488180	DEF6	Q9H4E7	631 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	BRMS1	Q9HCU9	246 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	CHMP3	Q9Y3E7	222 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	FHOD1	Q9Y613	1164 aa		4.34	□□□□□ -1.71
SP100-216	ENST00000488180	PATL2	C9JE40	543 aa	Known RBP	4.34	□□□□□ -1.72
SP100-216	ENST00000488180	PITPNM1	O00562	1244 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	GRIN3B	O60391	1043 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	PNMA6A	P0CW24	399 aa	Predicted RBP	4.34	□□□□□ -1.72
SP100-216	ENST00000488180	MCC	P23508	829 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	PLA2G4A	P47712	749 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	ST5	P78524	1137 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	TMCO3	Q6UWJ1	677 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	NFATC2IP	Q8NCF5	419 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	RBM46	Q8TBY0	533 aa	Known RBP	4.34	□□□□□ -1.72
SP100-216	ENST00000488180	SMARCE1	Q969G3	411 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	CRAMP1	Q96RY5	1269 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	ZCCHC17	Q9NP64	241 aa	Known RBP	4.34	□□□□□ -1.72
SP100-216	ENST00000488180	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.34	□□□□□ -1.72
SP100-216	ENST00000488180	CLIP2	Q9UDT6	1046 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	TRIM35	Q9UPQ4	493 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180	CCDC171	Q6TFL3	1326 aa		4.34	□□□□□ -1.72
SP100-216	ENST00000488180		A0A1B0GUL7	405 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	EIF4A1	P60842	406 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CHRNA2	Q15822	529 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CAMK4	Q16566	473 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	MTHFSD	Q2M296	383 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	TMEM87A	Q8NBN3	555 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	IL17RE	Q8NFR9	667 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ISCA1	Q9BUE6	129 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	UPF3B	Q9BZI7	483 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ATP6V1D	Q9Y5K8	247 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	MYH8	P13535	1937 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	USP27X	A6NNY8	438 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	SKIL	P12757	684 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	TMPO	P42166	694 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ZNF75D	P51815	510 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CASP7	P55210	303 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	SART3	Q15020	963 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ALDH1L2	Q3SY69	923 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	TTC31	Q49AM3	519 aa	Predicted RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ARHGAP29	Q52LW3	1261 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	SRL	Q86TD4	932 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	RAPGEF4	Q8WZA2	1011 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CCDC87	Q9NVE4	849 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	RRP15	Q9Y3B9	282 aa	Known RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CEP83	Q9Y592	693 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	PTPRC	P08575	1304 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CCDC172	P0C7W6	258 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	ZSCAN22	P10073	491 aa	Predicted RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	H2AFX	P16104	143 aa	Predicted RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	MAP3K11	Q16584	847 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.33	□□□□□ -1.72
SP100-216	ENST00000488180	FBXO3	Q9UK99	471 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	EXOC6B	Q9Y2D4	811 aa		4.33	□□□□□ -1.72
SP100-216	ENST00000488180	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.32	□□□□□ -1.72
SP100-216	ENST00000488180	NUTM2E	B1AL46	878 aa	Predicted RBP	4.32	□□□□□ -1.72
SP100-216	ENST00000488180	APBA3	O96018	575 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	POTEI	P0CG38	1075 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	LMAN1	P49257	510 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	TYRO3	Q06418	890 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	SF3B2	Q13435	895 aa	Known RBP	4.32	□□□□□ -1.72
SP100-216	ENST00000488180	E2F4	Q16254	413 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	ANO6	Q4KMQ2	910 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.32	□□□□□ -1.72
SP100-216	ENST00000488180	FILIP1	Q7Z7B0	1213 aa		4.32	□□□□□ -1.72
SP100-216	ENST00000488180	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.32	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms