RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 GNB5O14775 395 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 NID1P14543 1247 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 GSTT1P30711 240 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 SPRED3Q2MJR0 410 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 TRAPPC3LQ5T215 181 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 DMRTC2Q8IXT2 367 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 PSMG3-AS1Q96PY0 264 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 MUC3BQ9H195 1237 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 AKAP2Q9Y2D5 859 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 PPME1Q9Y570 386 aa6.52□□□□□ -1.37
ECHDC1-217ENST00000488087 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 EPHA1P21709 976 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 FAM117BQ6P1L5 589 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 TXNDC11Q6PKC3 985 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 BEND7Q8N7W2 519 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 ZNF428Q96B54 188 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
ECHDC1-217ENST00000488087 CNTNAP5Q8WYK1 1306 aa6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 LINC01387J3KSC0 135 aa6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 XRCC5P13010 732 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 LINC00114Q6XXX2 140 aa6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 TRIM11Q96F44 468 aa6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
ECHDC1-217ENST00000488087 SPDYE3A6NKU9 549 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 H3BRJ5 948 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 ITPKAP23677 461 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 BAG6P46379 1132 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 RAC1P63000 192 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 COL9A3Q14050 684 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 IKBKEQ14164 716 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 PLA2G4EQ3MJ16 856 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 SLC7A3Q8WY07 619 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 MRRFQ96E11 262 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 ZFYVE1Q9HBF4 777 aa6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 NOP53Q9NZM5 478 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-217ENST00000488087 ARL4DP49703 201 aa6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 PTPN12Q05209 780 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 PCDH1Q08174 1060 aa6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 VN1R5Q7Z5H4 357 aa6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 SPOCK3Q9BQ16 436 aa6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 ZNF576Q9H609 170 aa6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 GPN3Q9UHW5 284 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-217ENST00000488087 UNCXA6NJT0 531 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 TRIM28Q13263 835 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 TSNAXIP1Q2TAA8 658 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 PRRT3Q5FWE3 981 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 C3orf58Q8NDZ4 430 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 CRELD1Q96HD1 420 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
ECHDC1-217ENST00000488087 A0A0A0MRY4 1105 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 FSCN2O14926 492 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 FBXO24O75426 580 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 PIP4K2BP78356 416 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 TPTE2Q6XPS3 522 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 DTWD1Q8N5C7 304 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 PPM1HQ9ULR3 514 aa6.46□□□□□ -1.38
ECHDC1-217ENST00000488087 K7ELQ4 463 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 CTSHP09668 335 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 C19orf57Q0VDD7 668 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 SETDB1Q15047 1291 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 ZNF423Q2M1K9 1284 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 MAP4K3Q8IVH8 894 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 FMR1NBQ8N0W7 255 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 Q8N3U1 123 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 TMEM87AQ8NBN3 555 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 DDX54Q8TDD1 881 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 WNT8BQ93098 351 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 DCAF5Q96JK2 942 aa6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-217ENST00000488087 E9PSI1 815 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 B3GALT4O96024 378 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 GSTM4Q03013 218 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 PPP2R3AQ06190 1150 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 FAAP100Q0VG06 881 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 TAF1CQ15572 869 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 HGSNATQ68CP4 663 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 KLHL23Q8NBE8 558 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 BACH2Q9BYV9 841 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 CEP44Q9C0F1 390 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 TMEM39AQ9NV64 488 aa6.44□□□□□ -1.38
ECHDC1-217ENST00000488087 KIAA1522Q9P206 1035 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms