RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 LPIN2Q92539 896 aa21.19■□□□□ 0.98
HMG20B-212ENST00000487894 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
HMG20B-212ENST00000487894 ASTN2O75129 1339 aaPredicted RBP21.19■□□□□ 0.98
HMG20B-212ENST00000487894 TMEM88BA6NKF7 163 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 SLC5A1P13866 664 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 ATP2B3Q16720 1220 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 CAVIN4Q5BKX8 364 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 GGA3Q9NZ52 723 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 CEP126Q9P2H0 1117 aa21.18■□□□□ 0.98
HMG20B-212ENST00000487894 BCAMP50895 628 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 POLA2Q14181 598 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 MVPQ14764 893 aaKnown RBP21.17■□□□□ 0.98
HMG20B-212ENST00000487894 CDC37L1Q7L3B6 337 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 VPS37DQ86XT2 251 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 OGFOD1Q8N543 542 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
HMG20B-212ENST00000487894 IQSEC3Q9UPP2 1182 aaPredicted RBP21.17■□□□□ 0.98
HMG20B-212ENST00000487894 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
HMG20B-212ENST00000487894 MMP14P50281 582 aa21.16■□□□□ 0.98
HMG20B-212ENST00000487894 SCARF1Q14162 830 aa21.16■□□□□ 0.98
HMG20B-212ENST00000487894 SSH3Q8TE77 659 aa21.16■□□□□ 0.98
HMG20B-212ENST00000487894 PCNTO95613 3336 aa21.15■□□□□ 0.98
HMG20B-212ENST00000487894 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
HMG20B-212ENST00000487894 USP48Q86UV5 1035 aa21.15■□□□□ 0.98
HMG20B-212ENST00000487894 DCPSQ96C86 337 aaKnown RBP21.15■□□□□ 0.98
HMG20B-212ENST00000487894 HDAC9Q9UKV0 1011 aa21.15■□□□□ 0.98
HMG20B-212ENST00000487894 COG6Q9Y2V7 657 aa21.15■□□□□ 0.98
HMG20B-212ENST00000487894 PITPNM2Q9BZ72 1349 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 ADM5C9JUS6 153 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 WNT10BO00744 389 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 TFCP2Q12800 502 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 NBPF9Q3BBW0 867 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 MFSD14BQ5SR56 506 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 ANGEL2Q5VTE6 544 aaKnown RBP21.14■□□□□ 0.97
HMG20B-212ENST00000487894 CST9Q5W186 159 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 DLK2Q6UY11 383 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 KRT26Q7Z3Y9 468 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.14■□□□□ 0.97
HMG20B-212ENST00000487894 THSD7BQ9C0I4 1608 aa21.14■□□□□ 0.97
HMG20B-212ENST00000487894 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
HMG20B-212ENST00000487894 F8W031 263 aaPredicted RBP21.13■□□□□ 0.97
HMG20B-212ENST00000487894 CEP85Q6P2H3 762 aa21.13■□□□□ 0.97
HMG20B-212ENST00000487894 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
HMG20B-212ENST00000487894 ZBED3Q96IU2 234 aaPredicted RBP21.13■□□□□ 0.97
HMG20B-212ENST00000487894 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
HMG20B-212ENST00000487894 ZBTB22O15209 634 aa21.12■□□□□ 0.97
HMG20B-212ENST00000487894 CHAF1AQ13111 956 aaPredicted RBP21.12■□□□□ 0.97
HMG20B-212ENST00000487894 C20orf194Q5TEA3 1177 aa21.12■□□□□ 0.97
HMG20B-212ENST00000487894 FRAT2O75474 233 aaPredicted RBP21.11■□□□□ 0.97
HMG20B-212ENST00000487894 CELF2O95319 508 aaKnown RBP21.11■□□□□ 0.97
HMG20B-212ENST00000487894 ADORA1P30542 326 aa21.11■□□□□ 0.97
HMG20B-212ENST00000487894 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.11■□□□□ 0.97
HMG20B-212ENST00000487894 MTMR14Q8NCE2 650 aa21.11■□□□□ 0.97
HMG20B-212ENST00000487894 MKRN1Q9UHC7 482 aaKnown RBP21.11■□□□□ 0.97
HMG20B-212ENST00000487894 PCDHAC2Q9Y5I4 1007 aa21.11■□□□□ 0.97
HMG20B-212ENST00000487894 A0A1B0GUL7 405 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 PHKA1P46020 1223 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
HMG20B-212ENST00000487894 PDE3AQ14432 1141 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 GRIK5Q16478 980 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 SULF1Q8IWU6 871 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 ZNF408Q9H9D4 720 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 PAPPA2Q9BXP8 1791 aa21.1■□□□□ 0.97
HMG20B-212ENST00000487894 RASSF10A6NK89 507 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 TIMM10P62072 90 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 JMYQ8N9B5 988 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 TBC1D22AQ8WUA7 517 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 ABT1Q9ULW3 272 aaKnown RBP21.09■□□□□ 0.97
HMG20B-212ENST00000487894 TTF2Q9UNY4 1162 aaKnown RBP21.09■□□□□ 0.97
HMG20B-212ENST00000487894 SCAF8Q9UPN6 1271 aaKnown RBP21.09■□□□□ 0.97
HMG20B-212ENST00000487894 AKAP2Q9Y2D5 859 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 AKAP11Q9UKA4 1901 aa21.09■□□□□ 0.97
HMG20B-212ENST00000487894 MYH2Q9UKX2 1941 aa21.08■□□□□ 0.97
HMG20B-212ENST00000487894 DLGAP5Q15398 846 aa21.08■□□□□ 0.97
HMG20B-212ENST00000487894 CDCA5Q96FF9 252 aa21.08■□□□□ 0.97
HMG20B-212ENST00000487894 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
HMG20B-212ENST00000487894 TLL2Q9Y6L7 1015 aa21.08■□□□□ 0.97
HMG20B-212ENST00000487894 AOX1Q06278 1338 aa21.07■□□□□ 0.96
HMG20B-212ENST00000487894 SPDYE2BA6NHP3 402 aa21.07■□□□□ 0.96
HMG20B-212ENST00000487894 SPDYE6P0CI01 402 aa21.07■□□□□ 0.96
HMG20B-212ENST00000487894 CCDC102BQ68D86 513 aa21.07■□□□□ 0.96
HMG20B-212ENST00000487894 XAGE2Q96GT9 111 aa21.07■□□□□ 0.96
HMG20B-212ENST00000487894 SURF6O75683 361 aaKnown RBP21.06■□□□□ 0.96
HMG20B-212ENST00000487894 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
HMG20B-212ENST00000487894 SERPINA10Q9UK55 444 aa21.06■□□□□ 0.96
HMG20B-212ENST00000487894 MYO5AQ9Y4I1 1855 aaKnown RBP21.06■□□□□ 0.96
HMG20B-212ENST00000487894 SEMA3EO15041 775 aa21.05■□□□□ 0.96
HMG20B-212ENST00000487894 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
HMG20B-212ENST00000487894 DEFB115Q30KQ5 88 aa21.05■□□□□ 0.96
HMG20B-212ENST00000487894 SAPCD2Q86UD0 394 aa21.05■□□□□ 0.96
HMG20B-212ENST00000487894 APOBEC3FQ8IUX4 373 aaKnown RBP21.05■□□□□ 0.96
HMG20B-212ENST00000487894 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
HMG20B-212ENST00000487894 PRMT6Q96LA8 375 aaPredicted RBP21.05■□□□□ 0.96
HMG20B-212ENST00000487894 MAST2Q6P0Q8 1798 aa21.05■□□□□ 0.96
HMG20B-212ENST00000487894 CRKP46108 304 aa21.04■□□□□ 0.96
HMG20B-212ENST00000487894 VEGFBP49765 207 aa21.04■□□□□ 0.96
HMG20B-212ENST00000487894 NEUROD6Q96NK8 337 aa21.04■□□□□ 0.96
HMG20B-212ENST00000487894 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms