RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 KIF4AO95239 1232 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 ARL4DP49703 201 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 FBXL6Q8N531 539 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 GIMAP7Q8NHV1 300 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 SEC31BQ9NQW1 1179 aa7.78□□□□□ -1.16
UBR3-211ENST00000487689 SH2B1Q9NRF2 756 aaPredicted RBP7.78□□□□□ -1.16
UBR3-211ENST00000487689 F13BP05160 661 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 FOSL1P15407 271 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 ITGB5P18084 799 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 MZF1P28698 734 aaPredicted RBP7.77□□□□□ -1.17
UBR3-211ENST00000487689 NFXL1Q6ZNB6 911 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 TP53INP2Q8IXH6 220 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 CCDC82Q8N4S0 544 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 GTF3C2Q8WUA4 911 aaPredicted RBP7.77□□□□□ -1.17
UBR3-211ENST00000487689 FBXL18Q96ME1 805 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 RNF208Q9H0X6 261 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 KANSL3Q9P2N6 904 aa7.77□□□□□ -1.17
UBR3-211ENST00000487689 GAS2O43903 313 aaKnown RBP7.76□□□□□ -1.17
UBR3-211ENST00000487689 PRNPP04156 253 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 JUNBP17275 347 aaPredicted RBP7.76□□□□□ -1.17
UBR3-211ENST00000487689 MAP4P27816 1152 aaKnown RBP7.76□□□□□ -1.17
UBR3-211ENST00000487689 USP5P45974 858 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 EHHADHQ08426 723 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 FDX2Q6P4F2 183 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 TMEM63CQ9P1W3 806 aa7.76□□□□□ -1.17
UBR3-211ENST00000487689 FAM13AO94988 1023 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 CYP2E1P05181 493 aaPredicted RBP7.75□□□□□ -1.17
UBR3-211ENST00000487689 EIF1AXP47813 144 aaKnown RBP7.75□□□□□ -1.17
UBR3-211ENST00000487689 PIP4K2BP78356 416 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 SGO2Q562F6 1265 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 XKR5Q6UX68 686 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 CEP120Q8N960 986 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 RUSC1Q9BVN2 902 aa7.75□□□□□ -1.17
UBR3-211ENST00000487689 H3BRJ5 948 aa7.74□□□□□ -1.17
UBR3-211ENST00000487689 PDGFAP04085 211 aa7.74□□□□□ -1.17
UBR3-211ENST00000487689 MPSTP25325 297 aa7.74□□□□□ -1.17
UBR3-211ENST00000487689 WNT8BQ93098 351 aa7.74□□□□□ -1.17
UBR3-211ENST00000487689 PDE2AO00408 941 aaPredicted RBP7.73□□□□□ -1.17
UBR3-211ENST00000487689 PHACTR2O75167 634 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 EDN3P14138 238 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 RXRBP28702 533 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 NLRP12P59046 1061 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 SF3B2Q13435 895 aaKnown RBP7.73□□□□□ -1.17
UBR3-211ENST00000487689 C1orf127Q8N9H9 656 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
UBR3-211ENST00000487689 KRTAP4-11Q9BYQ6 195 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 SLAIN2Q9P270 581 aa7.73□□□□□ -1.17
UBR3-211ENST00000487689 ABL1P00519 1130 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 SSFA2P28290 1259 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
UBR3-211ENST00000487689 ZNF648Q5T619 568 aaPredicted RBP7.72□□□□□ -1.17
UBR3-211ENST00000487689 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 SHISA5Q8N114 240 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 SNX29Q8TEQ0 813 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 SLC7A3Q8WY07 619 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 ADAM19Q9H013 955 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 OSGEPQ9NPF4 335 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
UBR3-211ENST00000487689 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
UBR3-211ENST00000487689 SALL4Q9UJQ4 1053 aa7.71□□□□□ -1.18
UBR3-211ENST00000487689 POLIQ9UNA4 740 aa7.71□□□□□ -1.18
UBR3-211ENST00000487689 FBLN7Q53RD9 439 aa7.7□□□□□ -1.18
UBR3-211ENST00000487689 FLCNQ8NFG4 579 aa7.7□□□□□ -1.18
UBR3-211ENST00000487689 GGNBP2Q9H3C7 697 aa7.7□□□□□ -1.18
UBR3-211ENST00000487689 DZANK1Q9NVP4 752 aa7.7□□□□□ -1.18
UBR3-211ENST00000487689 BSDC1Q9NW68 430 aaPredicted RBP7.7□□□□□ -1.18
UBR3-211ENST00000487689 MEGF11A6BM72 1044 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 CYP26A1O43174 497 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 FKBP4Q02790 459 aaKnown RBP eCLIP7.69□□□□□ -1.18
UBR3-211ENST00000487689 C19orf57Q0VDD7 668 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 NFKBIBQ15653 356 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 ZNF124Q15973 351 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 OSMRQ99650 979 aa7.69□□□□□ -1.18
UBR3-211ENST00000487689 A6NHS1 94 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 TMEM88BA6NKF7 163 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 MTMR3Q13615 1198 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 IKBKEQ14164 716 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 TMEM102Q8N9M5 508 aaPredicted RBP7.68□□□□□ -1.18
UBR3-211ENST00000487689 AGBL5Q8NDL9 886 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 BSNDQ8WZ55 320 aa7.68□□□□□ -1.18
UBR3-211ENST00000487689 METTL22Q9BUU2 404 aaPredicted RBP7.68□□□□□ -1.18
UBR3-211ENST00000487689 FAM95CA0A1B0GW59 222 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 PAPLNO95428 1278 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 NEFLP07196 543 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 SPOCD1Q6ZMY3 1216 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 C12orf50Q8NA57 414 aaPredicted RBP7.67□□□□□ -1.18
UBR3-211ENST00000487689 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 PAK6Q9NQU5 681 aaPredicted RBP7.67□□□□□ -1.18
UBR3-211ENST00000487689 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
UBR3-211ENST00000487689 DBX1A6NMT0 343 aa7.66□□□□□ -1.18
UBR3-211ENST00000487689 TNFRSF21O75509 655 aa7.66□□□□□ -1.18
UBR3-211ENST00000487689 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
UBR3-211ENST00000487689 EREGO14944 169 aa7.65□□□□□ -1.18
UBR3-211ENST00000487689 ACPPP15309 386 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms