RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ARHGAP25P42331 645 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TAF4BQ92750 862 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCDC114Q96M63 670 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 GOLGA8AA7E2F4 631 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 HAND2P61296 217 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KRT83P78385 493 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SRLQ86TD4 932 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NFE2L3Q9Y4A8 694 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 GRM8O00222 908 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CDC23Q9UJX2 597 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 FANCAO15360 1455 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MAATS1Q7Z4T9 603 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CAPZA3Q96KX2 299 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 ADCY10Q96PN6 1610 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 FAM204AQ9H8W3 233 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PCDHA7Q9UN72 937 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 E2F4Q16254 413 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 DPCR1Q3MIW9 517 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 FUCA2Q9BTY2 467 aa17.38■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCDC172P0C7W6 258 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 GYS2P54840 703 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 ADKP55263 362 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MMS22LQ6ZRQ5 1243 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NYAP1Q6ZVC0 841 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 GOLGA6BA6NDN3 693 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 EIF3CLB5ME19 914 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 IKBKBO14920 756 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 EIF3CQ99613 913 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NCOA5Q9HCD5 579 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 A0A087WWV3 80 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 ARFGAP2Q8N6H7 521 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 FKBP15Q5T1M5 1219 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TMTC1Q8IUR5 882 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KSR2Q6VAB6 950 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PGBD1Q96JS3 809 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MYD88Q99836 296 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TRIM66O15016 1216 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PPFIA4O75335 1185 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 EPS15P42566 896 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCZ1BP86790 482 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCZ1P86791 482 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 HLTFQ14527 1009 aaKnown RBP eCLIP17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SLC12A7Q9Y666 1083 aa17.36■□□□□ 0.37
HLA-DQB1-209ENST00000487676 RESTQ13127 1097 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KCNH3Q9ULD8 1083 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NDUFA8P51970 172 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NCAPGQ9BPX3 1015 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 BCCIPQ9P287 314 aaKnown RBP eCLIP17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PRC1O43663 620 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TADA3O75528 432 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 VAV2P52735 878 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 STX17P56962 302 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 BCAS4Q8TDM0 211 aa17.35■□□□□ 0.37
HLA-DQB1-209ENST00000487676 AP5Z1O43299 807 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PFKFB2O60825 505 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TACC1O75410 805 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 AFMP43652 599 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CAPN7Q9Y6W3 813 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PFKFB1P16118 471 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KCNJ6P48051 423 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 OTUD7BQ6GQQ9 843 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 DHX58Q96C10 678 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 RABEP2Q9H5N1 569 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 KIF5AQ12840 1032 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CCDC122Q5T0U0 273 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
HLA-DQB1-209ENST00000487676 H2AFXP16104 143 aaPredicted RBP17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 ST5P78524 1137 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 RPGRIP1Q96KN7 1286 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SCLT1Q96NL6 688 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms