RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 SIL1Q9H173 461 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 DBNDD1Q9H9R9 158 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 TAF5LO75529 589 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 AAMPQ13685 434 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 SIRT2Q8IXJ6 389 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
TOP3B-216ENST00000487485 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 SAGE1Q9NXZ1 904 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
TOP3B-216ENST00000487485 XDHP47989 1333 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 HMMRO75330 724 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 CIAO1O76071 339 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 TBC1D16Q8TBP0 767 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
TOP3B-216ENST00000487485 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 GGA1Q9UJY5 639 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
TOP3B-216ENST00000487485 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-216ENST00000487485 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-216ENST00000487485 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
TOP3B-216ENST00000487485 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
TOP3B-216ENST00000487485 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-216ENST00000487485 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
TOP3B-216ENST00000487485 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
TOP3B-216ENST00000487485 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
TOP3B-216ENST00000487485 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
TOP3B-216ENST00000487485 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
TOP3B-216ENST00000487485 UFL1O94874 794 aa13.22□□□□□ -0.29
TOP3B-216ENST00000487485 PDE8BO95263 885 aa13.22□□□□□ -0.29
TOP3B-216ENST00000487485 SLC10A3P09131 477 aa13.22□□□□□ -0.29
TOP3B-216ENST00000487485 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
TOP3B-216ENST00000487485 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 SNAP23O00161 211 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 ECE2O60344 883 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 RPS12P25398 132 aaKnown RBP13.21□□□□□ -0.29
TOP3B-216ENST00000487485 KCNJ4P48050 445 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
TOP3B-216ENST00000487485 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
TOP3B-216ENST00000487485 EYA3Q99504 573 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
TOP3B-216ENST00000487485 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
TOP3B-216ENST00000487485 SASH1O94885 1247 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
TOP3B-216ENST00000487485 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 VGLL2Q8N8G2 317 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
TOP3B-216ENST00000487485 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
TOP3B-216ENST00000487485 TFCP2Q12800 502 aa13.19□□□□□ -0.3
TOP3B-216ENST00000487485 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
TOP3B-216ENST00000487485 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
TOP3B-216ENST00000487485 SCN9AQ15858 1988 aa13.19□□□□□ -0.3
TOP3B-216ENST00000487485 NEFLP07196 543 aa13.18□□□□□ -0.3
TOP3B-216ENST00000487485 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
TOP3B-216ENST00000487485 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
TOP3B-216ENST00000487485 RASAL3Q86YV0 1011 aa13.18□□□□□ -0.3
TOP3B-216ENST00000487485 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
TOP3B-216ENST00000487485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-216ENST00000487485 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
TOP3B-216ENST00000487485 G3V3G9 751 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 FGFR2P21802 821 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 KLRK1P26718 216 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 SCARF1Q14162 830 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 ANGEL2Q5VTE6 544 aaKnown RBP13.17□□□□□ -0.3
TOP3B-216ENST00000487485 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
TOP3B-216ENST00000487485 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 LPIN2Q92539 896 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 SCAF8Q9UPN6 1271 aaKnown RBP13.17□□□□□ -0.3
TOP3B-216ENST00000487485 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
TOP3B-216ENST00000487485 IRS2Q9Y4H2 1338 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 APBB1O00213 710 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 SLC5A1P13866 664 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 ZNF280AP59817 542 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 TIMM10P62072 90 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-216ENST00000487485 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
TOP3B-216ENST00000487485 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms