RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 UQCRFS1P1P0C7P4 283 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 KLRK1P26718 216 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 TTLL5Q6EMB2 1281 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 USP50Q70EL3 339 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-209ENST00000487428 PNMA8AQ86V59 439 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-209ENST00000487428 CLASRPQ8N2M8 674 aaKnown RBP8.19□□□□□ -1.1
PTPRE-209ENST00000487428 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 LRRCC1Q9C099 1032 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-209ENST00000487428 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
PTPRE-209ENST00000487428 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 G3V3G9 751 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 KIF3CO14782 793 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 DDNO94850 711 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 GYG1P46976 350 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 OS9Q13438 667 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 DOK7Q18PE1 504 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 DCAF8Q5TAQ9 597 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 VPS37DQ86XT2 251 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 EXOC6Q8TAG9 804 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 EAF2Q96CJ1 260 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 ZBED3Q96IU2 234 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 TAF1DQ9H5J8 278 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 ADARB2Q9NS39 739 aaKnown RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 EXOC6BQ9Y2D4 811 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 MAST3O60307 1309 aa8.18□□□□□ -1.1
PTPRE-209ENST00000487428 COL1A1P02452 1464 aaPredicted RBP8.18□□□□□ -1.1
PTPRE-209ENST00000487428 RAD17O75943 681 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 TOMM70O94826 608 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-209ENST00000487428 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-209ENST00000487428 BCAMP50895 628 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 TIMM10P62072 90 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 CCDC158Q5M9N0 1113 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
PTPRE-209ENST00000487428 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-209ENST00000487428 GPR101Q96P66 508 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-209ENST00000487428 TTC41PQ6P2S7 1318 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 SALL3Q9BXA9 1300 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 PITPNM2Q9BZ72 1349 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 LAMB1P07942 1786 aa8.17□□□□□ -1.1
PTPRE-209ENST00000487428 H7C1D1 291 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 ATP5JP18859 108 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 EPHX2P34913 555 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 PHKA1P46020 1223 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 GMPSP49915 693 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-209ENST00000487428 GTF2IP78347 998 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 FSTL1Q12841 308 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-209ENST00000487428 HHIPL2Q6UWX4 724 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 CERS5Q8N5B7 392 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 DBNDD2Q9BQY9 259 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 KCNQ5Q9NR82 932 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 CNOT7Q9UIV1 285 aaKnown RBP8.16□□□□□ -1.1
PTPRE-209ENST00000487428 SERPINA10Q9UK55 444 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 HDAC9Q9UKV0 1011 aa8.16□□□□□ -1.1
PTPRE-209ENST00000487428 AOX1Q06278 1338 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 NPM3O75607 178 aaKnown RBP8.15□□□□□ -1.1
PTPRE-209ENST00000487428 ADORA1P30542 326 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 MCAMP43121 646 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 FKBP1CQ5VVH2 108 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 AACSQ86V21 672 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 SPATA5Q8NB90 893 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 NEUROD6Q96NK8 337 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 OSBPL3Q9H4L5 887 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 HMG20BQ9P0W2 317 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 STAP2Q9UGK3 403 aa8.15□□□□□ -1.1
PTPRE-209ENST00000487428 GAKO14976 1311 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 IFIT2P09913 472 aaKnown RBP8.14□□□□□ -1.11
PTPRE-209ENST00000487428 EPS15P42566 896 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 NUCB1Q02818 461 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-209ENST00000487428 GORABQ5T7V8 394 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 SLF2Q8IX21 1173 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 SMC1BQ8NDV3 1235 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 ZDHHC15Q96MV8 337 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 MYOZ2Q9NPC6 264 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 GJA3Q9Y6H8 435 aa8.14□□□□□ -1.11
PTPRE-209ENST00000487428 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-209ENST00000487428 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-209ENST00000487428 IGHDP01880 384 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 TTC39AQ5SRH9 613 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 HAUS7Q99871 368 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 IL1RAPL2Q9NP60 686 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 ECHDC1Q9NTX5 307 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms