RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 GPC2Q8N158 579 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 RBM46Q8TBY0 533 aaKnown RBP9.04□□□□□ -0.96
UBE4B-209ENST00000487244 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 TAF1DQ9H5J8 278 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-209ENST00000487244 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
UBE4B-209ENST00000487244 KCNQ5Q9NR82 932 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 BSDC1Q9NW68 430 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-209ENST00000487244 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 XDHP47989 1333 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 SHTN1A0MZ66 631 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 ANKRD18BA2A2Z9 1011 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 SNAP23O00161 211 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 ECE2O60344 883 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 IGHMBP2P38935 993 aaKnown RBP9.03□□□□□ -0.96
UBE4B-209ENST00000487244 EPS15P42566 896 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 IFIT5Q13325 482 aaKnown RBP9.03□□□□□ -0.96
UBE4B-209ENST00000487244 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 KIF16BQ96L93 1317 aa9.03□□□□□ -0.96
UBE4B-209ENST00000487244 IQCA1LA6NCM1 817 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 SPDYE16A6NNV3 312 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 TRIM27P14373 513 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 HSPA6P17066 643 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 EPHX2P34913 555 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 PBX2P40425 430 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 GMPSP49915 693 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 CHRNDQ07001 517 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 TXNRD3Q86VQ6 643 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 FRAT1Q92837 279 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 EYA3Q99504 573 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 API5Q9BZZ5 524 aaKnown RBP9.02□□□□□ -0.97
UBE4B-209ENST00000487244 HACL1Q9UJ83 578 aa9.02□□□□□ -0.97
UBE4B-209ENST00000487244 MED23Q9ULK4 1368 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 POLR2AP24928 1970 aaKnown RBP9.01□□□□□ -0.97
UBE4B-209ENST00000487244 PSMD14O00487 310 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 TAF5LO75529 589 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 ATP2B4P23634 1241 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 CCT4P50991 539 aaKnown RBP9.01□□□□□ -0.97
UBE4B-209ENST00000487244 HTRA3P83110 453 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 CCDC57Q2TAC2 916 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 EAPPQ56P03 285 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-209ENST00000487244 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 SMC1BQ8NDV3 1235 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 CLUAP1Q96AJ1 413 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 MEIS3Q99687 375 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
UBE4B-209ENST00000487244 ZC3H12CQ9C0D7 883 aaKnown RBP9.01□□□□□ -0.97
UBE4B-209ENST00000487244 GPRC5DQ9NZD1 345 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 IRS2Q9Y4H2 1338 aa9.01□□□□□ -0.97
UBE4B-209ENST00000487244 FOSBP53539 338 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 FSTL1Q12841 308 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 TAF7LQ5H9L4 462 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 INTS3Q68E01 1043 aaKnown RBP9□□□□□ -0.97
UBE4B-209ENST00000487244 ATF7IPQ6VMQ6 1270 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
UBE4B-209ENST00000487244 ZNF804BA4D1E1 1349 aa9□□□□□ -0.97
UBE4B-209ENST00000487244 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 PLIN1O60240 522 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 EGFRP00533 1210 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
UBE4B-209ENST00000487244 RLBP1P12271 317 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 LMOD1P29536 600 aaPredicted RBP8.99□□□□□ -0.97
UBE4B-209ENST00000487244 TNIP1Q15025 636 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 LRRC24Q50LG9 513 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 MAP1SQ66K74 1059 aaPredicted RBP8.99□□□□□ -0.97
UBE4B-209ENST00000487244 LDHAL6AQ6ZMR3 332 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 LDHDQ86WU2 507 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 MXD3Q9BW11 206 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 ANKRD2Q9GZV1 360 aa8.99□□□□□ -0.97
UBE4B-209ENST00000487244 LRRFIP2Q9Y608 721 aaKnown RBP8.99□□□□□ -0.97
UBE4B-209ENST00000487244 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 KCNJ4P48050 445 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 RFX5P48382 616 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-209ENST00000487244 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-209ENST00000487244 TMEM57Q8N5G2 664 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 CNNM1Q9NRU3 951 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 RIPOR2Q9Y4F9 1068 aa8.98□□□□□ -0.97
UBE4B-209ENST00000487244 MYH13Q9UKX3 1938 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 ITGBL1O95965 494 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 APLP1P51693 650 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms