RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NECAB3Q96P71 396 aaPredicted RBP7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 FRRS1LQ9P0K9 344 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 ENC1O14682 589 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 GBP2P32456 591 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 KRT76Q01546 638 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 SRSF11Q05519 484 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 GDF6Q6KF10 455 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 SLCO4C1Q6ZQN7 724 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 VN1R5Q7Z5H4 357 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 DRC1Q96MC2 740 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 GPN3Q9UHW5 284 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 SOX13Q9UN79 622 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 INPP5FQ9Y2H2 1132 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
PRPF38A-203ENST00000487160 RGS9O75916 674 aaPredicted RBP7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 PWP1Q13610 501 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 ZNF423Q2M1K9 1284 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 TTC9Q92623 222 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 ACDQ96AP0 544 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 TMEM74Q96NL1 305 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 TMEM39AQ9NV64 488 aa7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
PRPF38A-203ENST00000487160 PAGE1O75459 146 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 EPXP11678 715 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 RLBP1P12271 317 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 CDC27P30260 824 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 LIG3P49916 1009 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 GNL2Q13823 731 aaKnown RBP7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 IRF7Q92985 503 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 ADAMTS1Q9UHI8 967 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 TLR6Q9Y2C9 796 aa7.81□□□□□ -1.16
PRPF38A-203ENST00000487160 ADAMTS2O95450 1211 aa7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 EPHA1P21709 976 aa7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 EIF4A3P38919 411 aaKnown RBP7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 PAK2Q13177 524 aa7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 PHC3Q8NDX5 983 aa7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
PRPF38A-203ENST00000487160 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 ALBP02768 609 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 ESRRAP11474 423 aaPredicted RBP7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 CDC25BP30305 580 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 PPP2R3AQ06190 1150 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 SF3A1Q15459 793 aaKnown RBP7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 GRIK5Q16478 980 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 TTBK2Q6IQ55 1244 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 GALNT6Q8NCL4 622 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
PRPF38A-203ENST00000487160 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 B3GALT4O96024 378 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 PF4P02776 101 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 BMP6P22004 513 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 DNAJA1P31689 397 aaKnown RBP7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 IKBKEQ14164 716 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 AGMOQ6ZNB7 445 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 KIAA0825Q8IV33 1275 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 IL22RA1Q8N6P7 574 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 EDARADDQ8WWZ3 215 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 RHOVQ96L33 236 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 PRKAG2Q9UGJ0 569 aa7.78□□□□□ -1.16
PRPF38A-203ENST00000487160 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 BAG6P46379 1132 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 GJA8P48165 433 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 CABP4P57796 275 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 CAMK2GQ13555 558 aaPredicted RBP7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 FBXL19Q6PCT2 694 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 CACTIN-AS1Q8N1I8 211 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 GMLQ99445 158 aa7.77□□□□□ -1.17
PRPF38A-203ENST00000487160 H3BRJ5 948 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 M0R082 166 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 GARTP22102 1010 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 NME2P22392 152 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 LMNB2Q03252 620 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 ARID5AQ03989 594 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 RASIP1Q5U651 963 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 HGSNATQ68CP4 663 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 TXNDC11Q6PKC3 985 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 VPS37DQ86XT2 251 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 STK35Q8TDR2 534 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 BTBD6Q96KE9 485 aa7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
PRPF38A-203ENST00000487160 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms