RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 COL1A1P02452 1464 aaPredicted RBP16.3■□□□□ 0.2
SF1-216ENST00000486867 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
SF1-216ENST00000486867 EGFRP00533 1210 aa16.3■□□□□ 0.2
SF1-216ENST00000486867 USP17L8P0C7I0 530 aa16.3■□□□□ 0.2
SF1-216ENST00000486867 BCAMP50895 628 aa16.3■□□□□ 0.2
SF1-216ENST00000486867 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■□□□□ 9.6
SF1-216ENST00000486867 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
SF1-216ENST00000486867 MXD3Q9BW11 206 aa16.3■□□□□ 0.2
SF1-216ENST00000486867 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
SF1-216ENST00000486867 PDS5AQ29RF7 1337 aaKnown RBP16.29■□□□□ 0.2
SF1-216ENST00000486867 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
SF1-216ENST00000486867 HSPA6P17066 643 aa16.29■□□□□ 0.2
SF1-216ENST00000486867 SAMD7Q7Z3H4 446 aa16.29■□□□□ 0.2
SF1-216ENST00000486867 ZBED3Q96IU2 234 aaPredicted RBP16.29■□□□□ 0.2
SF1-216ENST00000486867 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
SF1-216ENST00000486867 SEMA3EO15041 775 aa16.28■□□□□ 0.2
SF1-216ENST00000486867 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
SF1-216ENST00000486867 TIMM10P62072 90 aa16.28■□□□□ 0.2
SF1-216ENST00000486867 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
SF1-216ENST00000486867 HMMRO75330 724 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 ADORA1P30542 326 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 SUGT1Q9Y2Z0 365 aa16.27■□□□□ 0.2
SF1-216ENST00000486867 CEP350Q5VT06 3117 aa16.27■□□□□ 0.19
SF1-216ENST00000486867 PITPNM2Q9BZ72 1349 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 PHKA1P46020 1223 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
SF1-216ENST00000486867 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 MFSD14BQ5SR56 506 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
SF1-216ENST00000486867 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
SF1-216ENST00000486867 SALL1Q9NSC2 1324 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 APLP1P51693 650 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
SF1-216ENST00000486867 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
SF1-216ENST00000486867 HDLBPQ00341 1268 aaKnown RBP16.24■□□□□ 0.19
SF1-216ENST00000486867 AAMPQ13685 434 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 FBXW7Q969H0 707 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 MRIQ9BWK5 157 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 GNL3LQ9NVN8 582 aaKnown RBP16.24■□□□□ 0.19
SF1-216ENST00000486867 HDAC9Q9UKV0 1011 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
SF1-216ENST00000486867 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
SF1-216ENST00000486867 WNT10BO00744 389 aa16.23■□□□□ 0.19
SF1-216ENST00000486867 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
SF1-216ENST00000486867 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
SF1-216ENST00000486867 RAB11FIP3O75154 756 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
SF1-216ENST00000486867 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 SCARF1Q14162 830 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 GRIK5Q16478 980 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 RHPN1Q8TCX5 695 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
SF1-216ENST00000486867 CRBNQ96SW2 442 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 SERPINA10Q9UK55 444 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
SF1-216ENST00000486867 ASTN2O75129 1339 aaPredicted RBP16.21■□□□□ 0.19
SF1-216ENST00000486867 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
SF1-216ENST00000486867 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
SF1-216ENST00000486867 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 RBM26Q5T8P6 1007 aaKnown RBP16.21■□□□□ 0.19
SF1-216ENST00000486867 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 GGA3Q9NZ52 723 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
SF1-216ENST00000486867 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 MYH7P12883 1935 aa16.21■□□□□ 0.19
SF1-216ENST00000486867 MAST3O60307 1309 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 DBNDD2Q9BQY9 259 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
SF1-216ENST00000486867 DCTPP1Q9H773 170 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
SF1-216ENST00000486867 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
SF1-216ENST00000486867 DLGAP5Q15398 846 aa16.19■□□□□ 0.18
SF1-216ENST00000486867 CFAP100Q494V2 611 aa16.19■□□□□ 0.18
SF1-216ENST00000486867 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
SF1-216ENST00000486867 KRT26Q7Z3Y9 468 aa16.19■□□□□ 0.18
SF1-216ENST00000486867 DCPSQ96C86 337 aaKnown RBP16.19■□□□□ 0.18
SF1-216ENST00000486867 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
SF1-216ENST00000486867 FOCADQ5VW36 1801 aa16.19■□□□□ 0.18
SF1-216ENST00000486867 PAPPA2Q9BXP8 1791 aa16.18■□□□□ 0.18
SF1-216ENST00000486867 TRAF5O00463 557 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms