RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SPOCK3Q9BQ16 436 aa8.17□□□□□ -1.1
COPS3-209ENST00000486810 SRA1Q9HD15 236 aaKnown RBP8.17□□□□□ -1.1
COPS3-209ENST00000486810 DDX3YO15523 660 aaKnown RBP8.16□□□□□ -1.1
COPS3-209ENST00000486810 ADAM11O75078 769 aa8.16□□□□□ -1.1
COPS3-209ENST00000486810 WISP1O95388 367 aa8.16□□□□□ -1.1
COPS3-209ENST00000486810 APBA3O96018 575 aa8.16□□□□□ -1.1
COPS3-209ENST00000486810 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
COPS3-209ENST00000486810 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
COPS3-209ENST00000486810 PRPF40BQ6NWY9 871 aaKnown RBP8.16□□□□□ -1.1
COPS3-209ENST00000486810 RNF19AQ9NV58 838 aa8.16□□□□□ -1.1
COPS3-209ENST00000486810 GADD45BO75293 160 aaPredicted RBP8.15□□□□□ -1.1
COPS3-209ENST00000486810 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
COPS3-209ENST00000486810 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
COPS3-209ENST00000486810 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
COPS3-209ENST00000486810 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
COPS3-209ENST00000486810 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
COPS3-209ENST00000486810 C9orf172C9J069 976 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 ITPKAP23677 461 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 NACC1Q96RE7 527 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
COPS3-209ENST00000486810 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 CD68P34810 354 aaPredicted RBP8.13□□□□□ -1.11
COPS3-209ENST00000486810 CABP4P57796 275 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 SLC7A3Q8WY07 619 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 WNT8BQ93098 351 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 BCO2Q9BYV7 579 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 OSBPL7Q9BZF2 842 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 PODXL2Q9NZ53 605 aa8.13□□□□□ -1.11
COPS3-209ENST00000486810 MSTNO14793 375 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 ALX3O95076 343 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 NOS3P29474 1203 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 TRIM26Q12899 539 aaPredicted RBP8.12□□□□□ -1.11
COPS3-209ENST00000486810 IKBKEQ14164 716 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 NXPE4Q6UWF7 544 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 FBF1Q8TES7 1133 aa8.12□□□□□ -1.11
COPS3-209ENST00000486810 F8W735 103 aaPredicted RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 IGHA1P01876 353 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 GATA4P43694 442 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 TAGLNQ01995 201 aaKnown RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 PCDH1Q08174 1060 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 ALG1LQ6GMV1 187 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 FAM117BQ6P1L5 589 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 AGGF1Q8N302 714 aaeCLIP8.11□□□□□ -1.11
COPS3-209ENST00000486810 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 WFDC12Q8WWY7 111 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 NRSN2Q9GZP1 204 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 CLEC4MQ9H2X3 399 aaPredicted RBP8.11□□□□□ -1.11
COPS3-209ENST00000486810 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 USP21Q9UK80 565 aa8.11□□□□□ -1.11
COPS3-209ENST00000486810 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 IREB2P48200 963 aaKnown RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 FCGRTP55899 365 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 TXNRD3Q86VQ6 643 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 TMEM130Q8N3G9 435 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 C3orf58Q8NDZ4 430 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 SOX17Q9H6I2 414 aaPredicted RBP8.1□□□□□ -1.11
COPS3-209ENST00000486810 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
COPS3-209ENST00000486810 ZBTB7CA1YPR0 619 aa8.09□□□□□ -1.11
COPS3-209ENST00000486810 NLRP12P59046 1061 aa8.09□□□□□ -1.11
COPS3-209ENST00000486810 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
COPS3-209ENST00000486810 DLGAP3O95886 979 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 B3GALT4O96024 378 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 CTSBP07858 339 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 DOC2BQ14184 412 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 EAPPQ56P03 285 aaPredicted RBP8.08□□□□□ -1.12
COPS3-209ENST00000486810 Q6ZS46 218 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
COPS3-209ENST00000486810 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
COPS3-209ENST00000486810 ATP2B2Q01814 1243 aa8.07□□□□□ -1.12
COPS3-209ENST00000486810 ACAD11Q709F0 780 aa8.07□□□□□ -1.12
COPS3-209ENST00000486810 ANP32EQ9BTT0 268 aa8.07□□□□□ -1.12
COPS3-209ENST00000486810 AKTIPQ9H8T0 292 aa8.07□□□□□ -1.12
COPS3-209ENST00000486810 PRPF40AO75400 957 aaKnown RBP8.06□□□□□ -1.12
COPS3-209ENST00000486810 ECEL1O95672 775 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 ARL4DP49703 201 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 GSTM4Q03013 218 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 DUOXA2Q1HG44 320 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 DTHD1Q6ZMT9 781 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 DCAF11Q8TEB1 546 aa8.06□□□□□ -1.12
COPS3-209ENST00000486810 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
COPS3-209ENST00000486810 LOC100289279A0A1B0GTE1 492 aa8.05□□□□□ -1.12
COPS3-209ENST00000486810 ZNF157P51786 506 aaPredicted RBP8.05□□□□□ -1.12
COPS3-209ENST00000486810 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms