RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 CERS5Q8N5B7 392 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 CHMP4BQ9H444 224 aaKnown RBP22.56■■□□□ 1.2
COL1A1-207ENST00000486572 JAG2Q9Y219 1238 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 ARAP2Q8WZ64 1704 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 BCAMP50895 628 aa22.55■■□□□ 1.2
COL1A1-207ENST00000486572 G3BP1Q13283 466 aaKnown RBP eCLIP22.55■■□□□ 1.2
COL1A1-207ENST00000486572 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
COL1A1-207ENST00000486572 TFCP2Q12800 502 aa22.54■■□□□ 1.2
COL1A1-207ENST00000486572 ZBTB40Q9NUA8 1239 aa22.54■■□□□ 1.2
COL1A1-207ENST00000486572 HDAC9Q9UKV0 1011 aa22.54■■□□□ 1.2
COL1A1-207ENST00000486572 IQSEC3Q9UPP2 1182 aaPredicted RBP22.54■■□□□ 1.2
COL1A1-207ENST00000486572 AKAP2Q9Y2D5 859 aa22.53■■□□□ 1.2
COL1A1-207ENST00000486572 HTRA3P83110 453 aa22.52■■□□□ 1.2
COL1A1-207ENST00000486572 MFSD14BQ5SR56 506 aa22.52■■□□□ 1.2
COL1A1-207ENST00000486572 GGA3Q9NZ52 723 aa22.52■■□□□ 1.2
COL1A1-207ENST00000486572 SURF6O75683 361 aaKnown RBP22.51■■□□□ 1.19
COL1A1-207ENST00000486572 SCARF1Q14162 830 aa22.51■■□□□ 1.19
COL1A1-207ENST00000486572 CDC37L1Q7L3B6 337 aa22.51■■□□□ 1.19
COL1A1-207ENST00000486572 DCPSQ96C86 337 aaKnown RBP22.51■■□□□ 1.19
COL1A1-207ENST00000486572 GLIS2Q9BZE0 524 aaPredicted RBP22.51■■□□□ 1.19
COL1A1-207ENST00000486572 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
COL1A1-207ENST00000486572 A0A1B0GUL7 405 aa22.5■■□□□ 1.19
COL1A1-207ENST00000486572 TRAF5O00463 557 aa22.5■■□□□ 1.19
COL1A1-207ENST00000486572 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 OS9Q13438 667 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 TBC1D22AQ8WUA7 517 aa22.5■■□□□ 1.19
COL1A1-207ENST00000486572 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 ASTN2O75129 1339 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-207ENST00000486572 MYH13Q9UKX3 1938 aa22.49■■□□□ 1.19
COL1A1-207ENST00000486572 TMEM88BA6NKF7 163 aa22.49■■□□□ 1.19
COL1A1-207ENST00000486572 F8W031 263 aaPredicted RBP22.49■■□□□ 1.19
COL1A1-207ENST00000486572 ADORA1P30542 326 aa22.49■■□□□ 1.19
COL1A1-207ENST00000486572 TIMM10P62072 90 aa22.49■■□□□ 1.19
COL1A1-207ENST00000486572 KRT26Q7Z3Y9 468 aa22.49■■□□□ 1.19
COL1A1-207ENST00000486572 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
COL1A1-207ENST00000486572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
COL1A1-207ENST00000486572 WNT10BO00744 389 aa22.48■■□□□ 1.19
COL1A1-207ENST00000486572 FMR1Q06787 632 aaKnown RBP eCLIP22.48■■□□□ 1.19
COL1A1-207ENST00000486572 NBPF9Q3BBW0 867 aa22.48■■□□□ 1.19
COL1A1-207ENST00000486572 ANGEL2Q5VTE6 544 aaKnown RBP22.48■■□□□ 1.19
COL1A1-207ENST00000486572 COL1A1P02452 1464 aaPredicted RBP22.47■■□□□ 1.19
COL1A1-207ENST00000486572 CEP350Q5VT06 3117 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 PHKA1P46020 1223 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 CCDC102BQ68D86 513 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 USP48Q86UV5 1035 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 SULF1Q8IWU6 871 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 XAGE2Q96GT9 111 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 PITPNM2Q9BZ72 1349 aa22.47■■□□□ 1.19
COL1A1-207ENST00000486572 TRPM7Q96QT4 1865 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 SEMA3EO15041 775 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 HMMRO75330 724 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 DLGAP5Q15398 846 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 MTMR14Q8NCE2 650 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 ZBED3Q96IU2 234 aaPredicted RBP22.46■■□□□ 1.19
COL1A1-207ENST00000486572 NEUROD6Q96NK8 337 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 GPR108Q9NPR9 543 aa22.46■■□□□ 1.19
COL1A1-207ENST00000486572 TTF2Q9UNY4 1162 aaKnown RBP22.46■■□□□ 1.19
COL1A1-207ENST00000486572 ADM5C9JUS6 153 aa22.45■■□□□ 1.18
COL1A1-207ENST00000486572 ZBTB22O15209 634 aa22.45■■□□□ 1.18
COL1A1-207ENST00000486572 DNAJC5GQ8N7S2 189 aa22.45■■□□□ 1.18
COL1A1-207ENST00000486572 WDR66Q8TBY9 1149 aa22.45■■□□□ 1.18
COL1A1-207ENST00000486572 CFAP100Q494V2 611 aa22.44■■□□□ 1.18
COL1A1-207ENST00000486572 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
COL1A1-207ENST00000486572 DENND2AQ9ULE3 1009 aa22.44■■□□□ 1.18
COL1A1-207ENST00000486572 EXOC6BQ9Y2D4 811 aa22.44■■□□□ 1.18
COL1A1-207ENST00000486572 SUGT1Q9Y2Z0 365 aa22.44■■□□□ 1.18
COL1A1-207ENST00000486572 SPDYE2BA6NHP3 402 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 CELF2O95319 508 aaKnown RBP22.43■■□□□ 1.18
COL1A1-207ENST00000486572 SPDYE6P0CI01 402 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 GRIK5Q16478 980 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 HSP90AB4PQ58FF6 505 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 CST9Q5W186 159 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 ERC1Q8IUD2 1116 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
COL1A1-207ENST00000486572 MAST3O60307 1309 aa22.42■■□□□ 1.18
COL1A1-207ENST00000486572 POLR2AP24928 1970 aaKnown RBP22.42■■□□□ 1.18
COL1A1-207ENST00000486572 RBM5P52756 815 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL1A1-207ENST00000486572 RASGRF1Q13972 1273 aa22.42■■□□□ 1.18
COL1A1-207ENST00000486572 KLRG1Q96E93 195 aa22.42■■□□□ 1.18
COL1A1-207ENST00000486572 ZNF408Q9H9D4 720 aa22.42■■□□□ 1.18
COL1A1-207ENST00000486572 PCDHAC2Q9Y5I4 1007 aa22.42■■□□□ 1.18
COL1A1-207ENST00000486572 ECM29Q5VYK3 1845 aa22.41■■□□□ 1.18
COL1A1-207ENST00000486572 PDS5AQ29RF7 1337 aaKnown RBP22.41■■□□□ 1.18
COL1A1-207ENST00000486572 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
COL1A1-207ENST00000486572 MYO1BO43795 1136 aa22.41■■□□□ 1.18
COL1A1-207ENST00000486572 DLK2Q6UY11 383 aa22.41■■□□□ 1.18
COL1A1-207ENST00000486572 ABT1Q9ULW3 272 aaKnown RBP22.41■■□□□ 1.18
COL1A1-207ENST00000486572 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
COL1A1-207ENST00000486572 APOBEC3FQ8IUX4 373 aaKnown RBP22.4■■□□□ 1.18
COL1A1-207ENST00000486572 CNTNAP1P78357 1384 aa22.39■■□□□ 1.18
COL1A1-207ENST00000486572 CRKP46108 304 aa22.39■■□□□ 1.17
COL1A1-207ENST00000486572 TEKT1Q969V4 418 aa22.39■■□□□ 1.17
COL1A1-207ENST00000486572 CDCA5Q96FF9 252 aa22.39■■□□□ 1.17
COL1A1-207ENST00000486572 PRMT6Q96LA8 375 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms