RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 SCNN1DP51172 638 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 GCC1Q96CN9 775 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 TLR7Q9NYK1 1049 aaKnown RBP29.04■■■□□ 2.24
ABCF3-216ENST00000485921 DBNLQ9UJU6 430 aaKnown RBP29.04■■■□□ 2.24
ABCF3-216ENST00000485921 PSME4Q14997 1843 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 VEGFAP15692 232 aaPredicted RBP29.03■■■□□ 2.24
ABCF3-216ENST00000485921 CHAF1AQ13111 956 aaPredicted RBP29.03■■■□□ 2.24
ABCF3-216ENST00000485921 AGBL3Q8NEM8 1001 aa29.03■■■□□ 2.24
ABCF3-216ENST00000485921 DPF2Q92785 391 aa29.03■■■□□ 2.24
ABCF3-216ENST00000485921 IQCA1LA6NCM1 817 aa29.02■■■□□ 2.24
ABCF3-216ENST00000485921 LMOD1P29536 600 aaPredicted RBP29.02■■■□□ 2.24
ABCF3-216ENST00000485921 CCDC158Q5M9N0 1113 aa29.02■■■□□ 2.24
ABCF3-216ENST00000485921 GPRC5DQ9NZD1 345 aa29.02■■■□□ 2.24
ABCF3-216ENST00000485921 HACL1Q9UJ83 578 aa29.02■■■□□ 2.24
ABCF3-216ENST00000485921 SEMA3EO15041 775 aa29.01■■■□□ 2.23
ABCF3-216ENST00000485921 IFIT2P09913 472 aaKnown RBP29.01■■■□□ 2.23
ABCF3-216ENST00000485921 GMLQ99445 158 aa29.01■■■□□ 2.23
ABCF3-216ENST00000485921 DENND2AQ9ULE3 1009 aa29.01■■■□□ 2.23
ABCF3-216ENST00000485921 MYO3BQ8WXR4 1341 aa29■■■□□ 2.23
ABCF3-216ENST00000485921 ZBTB22O15209 634 aa29■■■□□ 2.23
ABCF3-216ENST00000485921 EPS15P42566 896 aa29■■■□□ 2.23
ABCF3-216ENST00000485921 FKBP1AP62942 108 aaKnown RBP29■■■□□ 2.23
ABCF3-216ENST00000485921 TTC39AQ5SRH9 613 aa29■■■□□ 2.23
ABCF3-216ENST00000485921 CNOT7Q9UIV1 285 aaKnown RBP29■■■□□ 2.23
ABCF3-216ENST00000485921 UQCRFS1P1P0C7P4 283 aa28.99■■■□□ 2.23
ABCF3-216ENST00000485921 ARID4AP29374 1257 aaPredicted RBP28.99■■■□□ 2.23
ABCF3-216ENST00000485921 RASGRF1Q13972 1273 aa28.99■■■□□ 2.23
ABCF3-216ENST00000485921 CERS5Q8N5B7 392 aa28.99■■■□□ 2.23
ABCF3-216ENST00000485921 ZNF646O15015 1829 aaPredicted RBP28.99■■■□□ 2.23
ABCF3-216ENST00000485921 SHTN1A0MZ66 631 aa28.98■■■□□ 2.23
ABCF3-216ENST00000485921 MFSD14BQ5SR56 506 aa28.98■■■□□ 2.23
ABCF3-216ENST00000485921 MICALL2Q8IY33 904 aa28.98■■■□□ 2.23
ABCF3-216ENST00000485921 H7C1D1 291 aa28.97■■■□□ 2.23
ABCF3-216ENST00000485921 ANKRD45Q5TZF3 282 aa28.97■■■□□ 2.23
ABCF3-216ENST00000485921 SMC5Q8IY18 1101 aa28.97■■■□□ 2.23
ABCF3-216ENST00000485921 WDR66Q8TBY9 1149 aa28.97■■■□□ 2.23
ABCF3-216ENST00000485921 TBC1D22AQ8WUA7 517 aa28.97■■■□□ 2.23
ABCF3-216ENST00000485921 TAF1DQ9H5J8 278 aaPredicted RBP28.97■■■□□ 2.23
ABCF3-216ENST00000485921 COL1A1P02452 1464 aaPredicted RBP28.97■■■□□ 2.23
ABCF3-216ENST00000485921 USP17L8P0C7I0 530 aa28.96■■■□□ 2.23
ABCF3-216ENST00000485921 EPHX2P34913 555 aa28.96■■■□□ 2.23
ABCF3-216ENST00000485921 ZNF512BQ96KM6 892 aaPredicted RBP28.96■■■□□ 2.23
ABCF3-216ENST00000485921 ZBTB47Q9UFB7 747 aaPredicted RBP28.96■■■□□ 2.23
ABCF3-216ENST00000485921 SCN4AP35499 1836 aa28.96■■■□□ 2.23
ABCF3-216ENST00000485921 SCARF1Q14162 830 aa28.95■■■□□ 2.22
ABCF3-216ENST00000485921 KIAA0825Q8IV33 1275 aa28.95■■■□□ 2.22
ABCF3-216ENST00000485921 HMG20BQ9P0W2 317 aa28.95■■■□□ 2.22
ABCF3-216ENST00000485921 PDS5AQ29RF7 1337 aaKnown RBP28.94■■■□□ 2.22
ABCF3-216ENST00000485921 KIF3CO14782 793 aa28.94■■■□□ 2.22
ABCF3-216ENST00000485921 MCAMP43121 646 aa28.94■■■□□ 2.22
ABCF3-216ENST00000485921 SPATA5Q8NB90 893 aa28.94■■■□□ 2.22
ABCF3-216ENST00000485921 ADARB2Q9NS39 739 aaKnown RBP28.94■■■□□ 2.22
ABCF3-216ENST00000485921 F8W031 263 aaPredicted RBP28.93■■■□□ 2.22
ABCF3-216ENST00000485921 ZNF280AP59817 542 aaPredicted RBP28.93■■■□□ 2.22
ABCF3-216ENST00000485921 B4GALNT3Q6L9W6 998 aa28.93■■■□□ 2.22
ABCF3-216ENST00000485921 PI16Q6UXB8 463 aa28.93■■■□□ 2.22
ABCF3-216ENST00000485921 OGFOD1Q8N543 542 aa28.93■■■□□ 2.22
ABCF3-216ENST00000485921 MYH13Q9UKX3 1938 aa28.92■■■□□ 2.22
ABCF3-216ENST00000485921 HDAC9Q9UKV0 1011 aa28.92■■■□□ 2.22
ABCF3-216ENST00000485921 GRIK5Q16478 980 aa28.91■■■□□ 2.22
ABCF3-216ENST00000485921 SAMD7Q7Z3H4 446 aa28.91■■■□□ 2.22
ABCF3-216ENST00000485921 PNMA8AQ86V59 439 aaPredicted RBP28.91■■■□□ 2.22
ABCF3-216ENST00000485921 C16orf71Q8IYS4 520 aaPredicted RBP28.91■■■□□ 2.22
ABCF3-216ENST00000485921 SNRKQ9NRH2 765 aa28.91■■■□□ 2.22
ABCF3-216ENST00000485921 SALL1Q9NSC2 1324 aa28.91■■■□□ 2.22
ABCF3-216ENST00000485921 MMP14P50281 582 aa28.9■■■□□ 2.22
ABCF3-216ENST00000485921 EAPPQ56P03 285 aaPredicted RBP28.9■■■□□ 2.22
ABCF3-216ENST00000485921 USP50Q70EL3 339 aaPredicted RBP28.9■■■□□ 2.22
ABCF3-216ENST00000485921 TTF2Q9UNY4 1162 aaKnown RBP28.9■■■□□ 2.22
ABCF3-216ENST00000485921 SUGT1Q9Y2Z0 365 aa28.9■■■□□ 2.22
ABCF3-216ENST00000485921 TBC1D10BQ4KMP7 808 aaPredicted RBP28.89■■■□□ 2.22
ABCF3-216ENST00000485921 RBM26Q5T8P6 1007 aaKnown RBP28.89■■■□□ 2.22
ABCF3-216ENST00000485921 ZGPATQ8N5A5 531 aaKnown RBP28.89■■■□□ 2.22
ABCF3-216ENST00000485921 MYOZ2Q9NPC6 264 aa28.89■■■□□ 2.22
ABCF3-216ENST00000485921 TRPM4Q8TD43 1214 aa28.88■■■□□ 2.21
ABCF3-216ENST00000485921 EGFRP00533 1210 aa28.87■■■□□ 2.21
ABCF3-216ENST00000485921 NUCB1Q02818 461 aa28.87■■■□□ 2.21
ABCF3-216ENST00000485921 LNPKQ9C0E8 428 aa28.87■■■□□ 2.21
ABCF3-216ENST00000485921 ABCF2Q9UG63 623 aa28.87■■■□□ 2.21
ABCF3-216ENST00000485921 LDHBP07195 334 aaKnown RBP28.86■■■□□ 2.21
ABCF3-216ENST00000485921 POTEIP0CG38 1075 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 POTEJP0CG39 1038 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 ATP5JP18859 108 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 ZAP70P43403 619 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 HIRAP54198 1017 aaPredicted RBP28.86■■■□□ 2.21
ABCF3-216ENST00000485921 KIF4BQ2VIQ3 1234 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 TBC1D9Q6ZT07 1266 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 CHD1LQ86WJ1 897 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 OTUD7AQ8TE49 926 aaPredicted RBP28.86■■■□□ 2.21
ABCF3-216ENST00000485921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.86■■■□□ 2.21
ABCF3-216ENST00000485921 GPATCH3Q96I76 525 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 ECHDC1Q9NTX5 307 aa28.86■■■□□ 2.21
ABCF3-216ENST00000485921 PRDX5P30044 214 aa28.85■■■□□ 2.21
ABCF3-216ENST00000485921 SPTY2D1Q68D10 685 aaPredicted RBP28.85■■■□□ 2.21
ABCF3-216ENST00000485921 CLEC11AQ9Y240 323 aa28.85■■■□□ 2.21
ABCF3-216ENST00000485921 AKAP11Q9UKA4 1901 aa28.84■■■□□ 2.21
ABCF3-216ENST00000485921 CYP2E1P05181 493 aaPredicted RBP28.84■■■□□ 2.21
ABCF3-216ENST00000485921 NDUFB9Q9Y6M9 179 aa28.84■■■□□ 2.21
ABCF3-216ENST00000485921 ERICH6Q7L0X2 663 aa28.83■■■□□ 2.21
ABCF3-216ENST00000485921 LDHDQ86WU2 507 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms