RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PRR23CQ6ZRP0 262 aa11.5□□□□□ -0.57
UBR3-210ENST00000484596 LATS2Q9NRM7 1088 aa11.5□□□□□ -0.57
UBR3-210ENST00000484596 SOX13Q9UN79 622 aa11.5□□□□□ -0.57
UBR3-210ENST00000484596 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
UBR3-210ENST00000484596 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
UBR3-210ENST00000484596 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
UBR3-210ENST00000484596 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
UBR3-210ENST00000484596 FOXD4L4Q8WXT5 416 aaPredicted RBP11.49□□□□□ -0.57
UBR3-210ENST00000484596 WNT8BQ93098 351 aa11.49□□□□□ -0.57
UBR3-210ENST00000484596 RBCK1Q9BYM8 510 aa11.49□□□□□ -0.57
UBR3-210ENST00000484596 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
UBR3-210ENST00000484596 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
UBR3-210ENST00000484596 UBASH3BQ8TF42 649 aa11.48□□□□□ -0.57
UBR3-210ENST00000484596 UBL7Q96S82 380 aaPredicted RBP11.48□□□□□ -0.57
UBR3-210ENST00000484596 POLR3DP05423 398 aaPredicted RBP11.47□□□□□ -0.57
UBR3-210ENST00000484596 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
UBR3-210ENST00000484596 BSNDQ8WZ55 320 aa11.47□□□□□ -0.57
UBR3-210ENST00000484596 OSGEPQ9NPF4 335 aa11.47□□□□□ -0.57
UBR3-210ENST00000484596 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
UBR3-210ENST00000484596 VN1R5Q7Z5H4 357 aa11.46□□□□□ -0.57
UBR3-210ENST00000484596 ASB16Q96NS5 453 aa11.46□□□□□ -0.57
UBR3-210ENST00000484596 TMC1Q8TDI8 760 aa11.45□□□□□ -0.58
UBR3-210ENST00000484596 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
UBR3-210ENST00000484596 BHLHE41Q9C0J9 482 aaPredicted RBP11.45□□□□□ -0.58
UBR3-210ENST00000484596 SCO2A0A1W2PP80 73 aa11.44□□□□□ -0.58
UBR3-210ENST00000484596 NLRP12P59046 1061 aa11.44□□□□□ -0.58
UBR3-210ENST00000484596 ASAP3Q8TDY4 903 aa11.44□□□□□ -0.58
UBR3-210ENST00000484596 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
UBR3-210ENST00000484596 C19orf57Q0VDD7 668 aa11.43□□□□□ -0.58
UBR3-210ENST00000484596 CEP41Q9BYV8 373 aa11.43□□□□□ -0.58
UBR3-210ENST00000484596 ARL4DP49703 201 aa11.42□□□□□ -0.58
UBR3-210ENST00000484596 IKBKEQ14164 716 aa11.42□□□□□ -0.58
UBR3-210ENST00000484596 DNAJC14Q6Y2X3 702 aaPredicted RBP11.42□□□□□ -0.58
UBR3-210ENST00000484596 METTL12A8MUP2 240 aa11.41□□□□□ -0.58
UBR3-210ENST00000484596 NEFLP07196 543 aa11.41□□□□□ -0.58
UBR3-210ENST00000484596 GALNT12Q8IXK2 581 aa11.41□□□□□ -0.58
UBR3-210ENST00000484596 ARMC10Q8N2F6 343 aa11.41□□□□□ -0.58
UBR3-210ENST00000484596 FAM129BQ96TA1 746 aa11.41□□□□□ -0.58
UBR3-210ENST00000484596 ANKRD33BA6NCL7 494 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 FSTP19883 344 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 COL19A1Q14993 1142 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 TMC7Q7Z402 723 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 FAM46AQ96IP4 442 aaKnown RBP11.4□□□□□ -0.58
UBR3-210ENST00000484596 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
UBR3-210ENST00000484596 A0A1W2PP55 124 aa11.39□□□□□ -0.59
UBR3-210ENST00000484596 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
UBR3-210ENST00000484596 DHX15O43143 795 aaKnown RBP11.38□□□□□ -0.59
UBR3-210ENST00000484596 ESRRAP11474 423 aaPredicted RBP11.38□□□□□ -0.59
UBR3-210ENST00000484596 ORC1Q13415 861 aa11.38□□□□□ -0.59
UBR3-210ENST00000484596 UTP4Q969X6 686 aaKnown RBP11.38□□□□□ -0.59
UBR3-210ENST00000484596 ALKBH8Q96BT7 664 aaKnown RBP11.38□□□□□ -0.59
UBR3-210ENST00000484596 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
UBR3-210ENST00000484596 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
UBR3-210ENST00000484596 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
UBR3-210ENST00000484596 RUSC1Q9BVN2 902 aa11.37□□□□□ -0.59
UBR3-210ENST00000484596 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
UBR3-210ENST00000484596 ZFP64Q9NPA5 681 aa11.37□□□□□ -0.59
UBR3-210ENST00000484596 CCNJLQ8IV13 435 aa11.36□□□□□ -0.59
UBR3-210ENST00000484596 TCF12Q99081 682 aa11.36□□□□□ -0.59
UBR3-210ENST00000484596 SOX17Q9H6I2 414 aaPredicted RBP11.36□□□□□ -0.59
UBR3-210ENST00000484596 LIN7BQ9HAP6 207 aa11.36□□□□□ -0.59
UBR3-210ENST00000484596 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
UBR3-210ENST00000484596 A0A096LPE4 126 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 A0A1W2PPZ6 126 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 TREHO43280 583 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 GRIA4P48058 902 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 SPRED3Q2MJR0 410 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 SLC51AQ86UW1 340 aa11.35□□□□□ -0.59
UBR3-210ENST00000484596 MEGF11A6BM72 1044 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 GPR182O15218 404 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 SART1O43290 800 aaKnown RBP11.34□□□□□ -0.59
UBR3-210ENST00000484596 IGHA2P01877 340 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 LRP8Q14114 963 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 ANKRD34AQ69YU3 496 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 MYRFLQ96LU7 910 aa11.34□□□□□ -0.59
UBR3-210ENST00000484596 LOC100289279A0A1B0GTE1 492 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 CPNE3O75131 537 aaKnown RBP11.33□□□□□ -0.6
UBR3-210ENST00000484596 PREPP48147 710 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 FGD1P98174 961 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 NPAS4Q8IUM7 802 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
UBR3-210ENST00000484596 HYAL3O43820 417 aaPredicted RBP11.32□□□□□ -0.6
UBR3-210ENST00000484596 DLGAP3O95886 979 aa11.32□□□□□ -0.6
UBR3-210ENST00000484596 GSTM4Q03013 218 aa11.32□□□□□ -0.6
UBR3-210ENST00000484596 DSC3Q14574 896 aa11.32□□□□□ -0.6
UBR3-210ENST00000484596 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
UBR3-210ENST00000484596 FDX2Q6P4F2 183 aa11.32□□□□□ -0.6
UBR3-210ENST00000484596 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 PCDH1Q08174 1060 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 ZNF423Q2M1K9 1284 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 TRIM42Q8IWZ5 723 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
UBR3-210ENST00000484596 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
UBR3-210ENST00000484596 HMX2A2RU54 273 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 EIF1AYO14602 144 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms