RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 DLGAP5Q15398 846 aa12.63□□□□□ -0.39
CPSF4-213ENST00000484112 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
CPSF4-213ENST00000484112 DEFB129Q9H1M3 183 aa12.63□□□□□ -0.39
CPSF4-213ENST00000484112 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 MMP14P50281 582 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 GCKRQ14397 625 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
CPSF4-213ENST00000484112 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
CPSF4-213ENST00000484112 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-213ENST00000484112 SNAP23O00161 211 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 TAF5LO75529 589 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 CHRNDQ07001 517 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-213ENST00000484112 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 PCDHAC2Q9Y5I4 1007 aa12.61□□□□□ -0.39
CPSF4-213ENST00000484112 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 PPP1R12BO60237 982 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-213ENST00000484112 INHBEP58166 350 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 ZBED3Q96IU2 234 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-213ENST00000484112 PLA2G12BQ9BX93 195 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 JAG2Q9Y219 1238 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 CHMP3Q9Y3E7 222 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
CPSF4-213ENST00000484112 MYO1BO43795 1136 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 CSF1RP07333 972 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 RBM5P52756 815 aaKnown RBP eCLIP12.59□□□□□ -0.393e-9■□□□□ 10.6
CPSF4-213ENST00000484112 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 OTOP1Q7RTM1 612 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 CERS5Q8N5B7 392 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
CPSF4-213ENST00000484112 IGF2BP3O00425 579 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 PLIN1O60240 522 aa12.58□□□□□ -0.4
CPSF4-213ENST00000484112 ZBTB48P10074 688 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
CPSF4-213ENST00000484112 NBPF12Q5TAG4 269 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 PRMT6Q96LA8 375 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
CPSF4-213ENST00000484112 MYH3P11055 1940 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 F6X3S4 739 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
CPSF4-213ENST00000484112 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
CPSF4-213ENST00000484112 CASP7P55210 303 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
CPSF4-213ENST00000484112 MAP3K11Q16584 847 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 CD99L2Q8TCZ2 262 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
CPSF4-213ENST00000484112 ZNF646O15015 1829 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-213ENST00000484112 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 GRM8O00222 908 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-213ENST00000484112 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 CRHR2Q13324 411 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 RASA3Q14644 834 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
CPSF4-213ENST00000484112 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-213ENST00000484112 UTYO14607 1347 aa12.56□□□□□ -0.4
CPSF4-213ENST00000484112 TNRC18O15417 2968 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-213ENST00000484112 IL1R1P14778 569 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 GJA5P36382 358 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 TAF7LQ5H9L4 462 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-213ENST00000484112 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-213ENST00000484112 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 AOX1Q06278 1338 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 IRS2Q9Y4H2 1338 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 SSC5DA1L4H1 1573 aa12.55□□□□□ -0.4
CPSF4-213ENST00000484112 FOXO4P98177 505 aa12.54□□□□□ -0.4
CPSF4-213ENST00000484112 SP3Q02447 781 aa12.54□□□□□ -0.4
CPSF4-213ENST00000484112 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
CPSF4-213ENST00000484112 C15orf52Q6ZUT6 534 aaKnown RBP12.54□□□□□ -0.4
CPSF4-213ENST00000484112 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
CPSF4-213ENST00000484112 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
CPSF4-213ENST00000484112 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
CPSF4-213ENST00000484112 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
CPSF4-213ENST00000484112 EN2P19622 333 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms