RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TRPM7Q96QT4 1865 aa22.33■■□□□ 1.17
HDAC6-225ENST00000483506 BCAMP50895 628 aa22.33■■□□□ 1.17
HDAC6-225ENST00000483506 CEP85Q6P2H3 762 aa22.33■■□□□ 1.17
HDAC6-225ENST00000483506 OGFOD1Q8N543 542 aa22.33■■□□□ 1.17
HDAC6-225ENST00000483506 CREBZFQ9NS37 354 aa22.33■■□□□ 1.17
HDAC6-225ENST00000483506 DNAJC5GQ8N7S2 189 aa22.32■■□□□ 1.16
HDAC6-225ENST00000483506 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
HDAC6-225ENST00000483506 ZBTB40Q9NUA8 1239 aa22.32■■□□□ 1.16
HDAC6-225ENST00000483506 MYH13Q9UKX3 1938 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 POLR2AP24928 1970 aaKnown RBP22.31■■□□□ 1.16
HDAC6-225ENST00000483506 RBM26Q5T8P6 1007 aaKnown RBP22.31■■□□□ 1.16
HDAC6-225ENST00000483506 C20orf194Q5TEA3 1177 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 CDC37L1Q7L3B6 337 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 KIAA0825Q8IV33 1275 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 ZBED3Q96IU2 234 aaPredicted RBP22.31■■□□□ 1.16
HDAC6-225ENST00000483506 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
HDAC6-225ENST00000483506 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
HDAC6-225ENST00000483506 TFCP2Q12800 502 aa22.3■■□□□ 1.16
HDAC6-225ENST00000483506 G3BP1Q13283 466 aaKnown RBP eCLIP22.3■■□□□ 1.16
HDAC6-225ENST00000483506 MFSD14BQ5SR56 506 aa22.3■■□□□ 1.16
HDAC6-225ENST00000483506 MTMR14Q8NCE2 650 aa22.3■■□□□ 1.16
HDAC6-225ENST00000483506 GLIS2Q9BZE0 524 aaPredicted RBP22.3■■□□□ 1.16
HDAC6-225ENST00000483506 PITPNM2Q9BZ72 1349 aa22.3■■□□□ 1.16
HDAC6-225ENST00000483506 TMEM88BA6NKF7 163 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 HTRA3P83110 453 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 SCARF1Q14162 830 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 TBC1D22AQ8WUA7 517 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 GGA3Q9NZ52 723 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 JAG2Q9Y219 1238 aa22.29■■□□□ 1.16
HDAC6-225ENST00000483506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
HDAC6-225ENST00000483506 TRAF5O00463 557 aa22.28■■□□□ 1.16
HDAC6-225ENST00000483506 WNT10BO00744 389 aa22.28■■□□□ 1.16
HDAC6-225ENST00000483506 DCPSQ96C86 337 aaKnown RBP22.28■■□□□ 1.16
HDAC6-225ENST00000483506 ASTN2O75129 1339 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-225ENST00000483506 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-225ENST00000483506 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
HDAC6-225ENST00000483506 A0A1B0GUL7 405 aa22.27■■□□□ 1.16
HDAC6-225ENST00000483506 RPAP2Q8IXW5 612 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-225ENST00000483506 IQSEC3Q9UPP2 1182 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-225ENST00000483506 SEMA3EO15041 775 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 ADORA1P30542 326 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.157e-6■■□□□ 12.8
HDAC6-225ENST00000483506 NBPF9Q3BBW0 867 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 ANGEL2Q5VTE6 544 aaKnown RBP22.26■■□□□ 1.15
HDAC6-225ENST00000483506 KRT26Q7Z3Y9 468 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 GPR108Q9NPR9 543 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 GNL3LQ9NVN8 582 aaKnown RBP22.26■■□□□ 1.15
HDAC6-225ENST00000483506 SUGT1Q9Y2Z0 365 aa22.26■■□□□ 1.15
HDAC6-225ENST00000483506 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-225ENST00000483506 SURF6O75683 361 aaKnown RBP22.25■■□□□ 1.15
HDAC6-225ENST00000483506 PHKA1P46020 1223 aa22.25■■□□□ 1.15
HDAC6-225ENST00000483506 RRP1P56182 461 aaKnown RBP22.25■■□□□ 1.15
HDAC6-225ENST00000483506 TIMM10P62072 90 aa22.25■■□□□ 1.15
HDAC6-225ENST00000483506 CST9Q5W186 159 aa22.25■■□□□ 1.15
HDAC6-225ENST00000483506 USP48Q86UV5 1035 aa22.25■■□□□ 1.15
HDAC6-225ENST00000483506 KLRG1Q96E93 195 aa22.25■■□□□ 1.15
HDAC6-225ENST00000483506 PDS5AQ29RF7 1337 aaKnown RBP22.25■■□□□ 1.15
HDAC6-225ENST00000483506 CHAF1AQ13111 956 aaPredicted RBP22.24■■□□□ 1.15
HDAC6-225ENST00000483506 CCDC102BQ68D86 513 aa22.24■■□□□ 1.15
HDAC6-225ENST00000483506 SULF1Q8IWU6 871 aa22.24■■□□□ 1.15
HDAC6-225ENST00000483506 XAGE2Q96GT9 111 aa22.24■■□□□ 1.15
HDAC6-225ENST00000483506 SERPINA10Q9UK55 444 aa22.24■■□□□ 1.15
HDAC6-225ENST00000483506 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
HDAC6-225ENST00000483506 DLGAP5Q15398 846 aa22.23■■□□□ 1.15
HDAC6-225ENST00000483506 SIRT2Q8IXJ6 389 aa22.23■■□□□ 1.15
HDAC6-225ENST00000483506 WDR66Q8TBY9 1149 aa22.23■■□□□ 1.15
HDAC6-225ENST00000483506 DENND2AQ9ULE3 1009 aa22.23■■□□□ 1.15
HDAC6-225ENST00000483506 TTF2Q9UNY4 1162 aaKnown RBP22.23■■□□□ 1.15
HDAC6-225ENST00000483506 SALL1Q9NSC2 1324 aa22.23■■□□□ 1.15
HDAC6-225ENST00000483506 SPDYE2BA6NHP3 402 aa22.22■■□□□ 1.15
HDAC6-225ENST00000483506 ADM5C9JUS6 153 aa22.22■■□□□ 1.15
HDAC6-225ENST00000483506 SPDYE6P0CI01 402 aa22.22■■□□□ 1.15
HDAC6-225ENST00000483506 HDLBPQ00341 1268 aaKnown RBP22.22■■□□□ 1.15
HDAC6-225ENST00000483506 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
HDAC6-225ENST00000483506 CNTNAP1P78357 1384 aa22.22■■□□□ 1.15
HDAC6-225ENST00000483506 RASSF10A6NK89 507 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 HMMRO75330 724 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 CELF2O95319 508 aaKnown RBP22.21■■□□□ 1.15
HDAC6-225ENST00000483506 OS9Q13438 667 aaPredicted RBP22.21■■□□□ 1.15
HDAC6-225ENST00000483506 GRIK5Q16478 980 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 TNNI3KQ59H18 835 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 MRIQ9BWK5 157 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 FPGT-TNNI3KV9GXZ4 949 aa22.21■■□□□ 1.15
HDAC6-225ENST00000483506 PCDHAC2Q9Y5I4 1007 aa22.2■■□□□ 1.14
HDAC6-225ENST00000483506 RASGRF1Q13972 1273 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 DLK2Q6UY11 383 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 ERC1Q8IUD2 1116 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 APOBEC3FQ8IUX4 373 aaKnown RBP22.19■■□□□ 1.14
HDAC6-225ENST00000483506 JMYQ8N9B5 988 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 PRMT6Q96LA8 375 aaPredicted RBP22.19■■□□□ 1.14
HDAC6-225ENST00000483506 NEUROD6Q96NK8 337 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 TLL2Q9Y6L7 1015 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 MAST3O60307 1309 aa22.19■■□□□ 1.14
HDAC6-225ENST00000483506 ARID4AP29374 1257 aaPredicted RBP22.18■■□□□ 1.14
HDAC6-225ENST00000483506 CRKP46108 304 aa22.18■■□□□ 1.14
HDAC6-225ENST00000483506 CDCA5Q96FF9 252 aa22.18■■□□□ 1.14
HDAC6-225ENST00000483506 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
HDAC6-225ENST00000483506 HHIPL1Q96JK4 782 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms