RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
SSR1-208ENST00000483409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.6■□□□□ 0.25
SSR1-208ENST00000483409 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
SSR1-208ENST00000483409 SASH1O94885 1247 aa16.59■□□□□ 0.25
SSR1-208ENST00000483409 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
SSR1-208ENST00000483409 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
SSR1-208ENST00000483409 MYOZ2Q9NPC6 264 aa16.59■□□□□ 0.25
SSR1-208ENST00000483409 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
SSR1-208ENST00000483409 ITGBL1O95965 494 aaPredicted RBP16.58■□□□□ 0.24
SSR1-208ENST00000483409 ADORA1P30542 326 aa16.58■□□□□ 0.24
SSR1-208ENST00000483409 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
SSR1-208ENST00000483409 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.24
SSR1-208ENST00000483409 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
SSR1-208ENST00000483409 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
SSR1-208ENST00000483409 ASTN2O75129 1339 aaPredicted RBP16.57■□□□□ 0.24
SSR1-208ENST00000483409 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
SSR1-208ENST00000483409 APLP1P51693 650 aa16.57■□□□□ 0.24
SSR1-208ENST00000483409 TIMM10P62072 90 aa16.57■□□□□ 0.24
SSR1-208ENST00000483409 HTRA3P83110 453 aa16.57■□□□□ 0.24
SSR1-208ENST00000483409 MFSD14BQ5SR56 506 aa16.57■□□□□ 0.24
SSR1-208ENST00000483409 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
SSR1-208ENST00000483409 COL1A1P02452 1464 aaPredicted RBP16.56■□□□□ 0.24
SSR1-208ENST00000483409 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 A0A1B0GUL7 405 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 TRAF5O00463 557 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 ZC3H15Q8WU90 426 aaKnown RBP16.56■□□□□ 0.24
SSR1-208ENST00000483409 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
SSR1-208ENST00000483409 PHKA1P46020 1223 aa16.55■□□□□ 0.24
SSR1-208ENST00000483409 FKBP1AP62942 108 aaKnown RBP16.55■□□□□ 0.24
SSR1-208ENST00000483409 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
SSR1-208ENST00000483409 SCARF1Q14162 830 aa16.55■□□□□ 0.24
SSR1-208ENST00000483409 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
SSR1-208ENST00000483409 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
SSR1-208ENST00000483409 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
SSR1-208ENST00000483409 NOP58Q9Y2X3 529 aaKnown RBP16.55■□□□□ 0.24
SSR1-208ENST00000483409 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
SSR1-208ENST00000483409 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
SSR1-208ENST00000483409 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
SSR1-208ENST00000483409 RPAP2Q8IXW5 612 aaPredicted RBP16.54■□□□□ 0.24
SSR1-208ENST00000483409 XAGE2Q96GT9 111 aa16.54■□□□□ 0.24
SSR1-208ENST00000483409 GNL3LQ9NVN8 582 aaKnown RBP16.54■□□□□ 0.24
SSR1-208ENST00000483409 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
SSR1-208ENST00000483409 HMMRO75330 724 aa16.53■□□□□ 0.24
SSR1-208ENST00000483409 GRIK5Q16478 980 aa16.53■□□□□ 0.24
SSR1-208ENST00000483409 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
SSR1-208ENST00000483409 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
SSR1-208ENST00000483409 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
SSR1-208ENST00000483409 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
SSR1-208ENST00000483409 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
SSR1-208ENST00000483409 ADM5C9JUS6 153 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 WNT10BO00744 389 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 TNNI3KQ59H18 835 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 DLK2Q6UY11 383 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
SSR1-208ENST00000483409 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.24
SSR1-208ENST00000483409 MMP14P50281 582 aa16.51■□□□□ 0.23
SSR1-208ENST00000483409 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
SSR1-208ENST00000483409 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
SSR1-208ENST00000483409 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
SSR1-208ENST00000483409 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
SSR1-208ENST00000483409 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
SSR1-208ENST00000483409 TMEM88BA6NKF7 163 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 APBB1O00213 710 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
SSR1-208ENST00000483409 RASGRF1Q13972 1273 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 ZBED3Q96IU2 234 aaPredicted RBP16.5■□□□□ 0.23
SSR1-208ENST00000483409 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 DENND2AQ9ULE3 1009 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
SSR1-208ENST00000483409 SEMA3EO15041 775 aa16.49■□□□□ 0.23
SSR1-208ENST00000483409 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
SSR1-208ENST00000483409 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
SSR1-208ENST00000483409 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
SSR1-208ENST00000483409 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
SSR1-208ENST00000483409 PITPNM2Q9BZ72 1349 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
SSR1-208ENST00000483409 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
SSR1-208ENST00000483409 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 CST9Q5W186 159 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 MTMR14Q8NCE2 650 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 PRMT6Q96LA8 375 aaPredicted RBP16.48■□□□□ 0.23
SSR1-208ENST00000483409 CCDC8Q9H0W5 538 aaPredicted RBP16.48■□□□□ 0.23
SSR1-208ENST00000483409 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
SSR1-208ENST00000483409 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
SSR1-208ENST00000483409 AOX1Q06278 1338 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 PRDX5P30044 214 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 CRKP46108 304 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms