RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MANSC4A6NHS7 340 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-206ENST00000483030 TAF5LO75529 589 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 CSF1RP07333 972 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 INHBEP58166 350 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 CHRNDQ07001 517 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 CERS5Q8N5B7 392 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-206ENST00000483030 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 TRIM17Q9Y577 477 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
CSDE1-206ENST00000483030 AKAP11Q9UKA4 1901 aa9.44□□□□□ -0.9
CSDE1-206ENST00000483030 CLRN2A0PK11 232 aa9.44□□□□□ -0.9
CSDE1-206ENST00000483030 F8W031 263 aaPredicted RBP9.44□□□□□ -0.9
CSDE1-206ENST00000483030 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
CSDE1-206ENST00000483030 CASP7P55210 303 aa9.44□□□□□ -0.9
CSDE1-206ENST00000483030 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
CSDE1-206ENST00000483030 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
CSDE1-206ENST00000483030 ANKRD18BA2A2Z9 1011 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 IGF2BP3O00425 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSDE1-206ENST00000483030 ABCB7O75027 752 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 FKBP5Q13451 457 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-206ENST00000483030 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 SUPT20HL1Q3ZLR7 823 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-206ENST00000483030 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 MTMR14Q8NCE2 650 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 DNAAF4Q8WXU2 420 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-206ENST00000483030 MYH16Q9H6N6 1097 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 VEZTQ9HBM0 779 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 JAG2Q9Y219 1238 aa9.43□□□□□ -0.9
CSDE1-206ENST00000483030 AOX1Q06278 1338 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 MYO1BO43795 1136 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-206ENST00000483030 IL1R1P14778 569 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 RBM5P52756 815 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSDE1-206ENST00000483030 FLIIQ13045 1269 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 IFIT5Q13325 482 aaKnown RBP9.42□□□□□ -0.9
CSDE1-206ENST00000483030 INTS3Q68E01 1043 aaKnown RBP9.42□□□□□ -0.9
CSDE1-206ENST00000483030 C15orf52Q6ZUT6 534 aaKnown RBP9.42□□□□□ -0.9
CSDE1-206ENST00000483030 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 CHMP3Q9Y3E7 222 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 PPP2R3BQ9Y5P8 575 aa9.42□□□□□ -0.9
CSDE1-206ENST00000483030 IRS2Q9Y4H2 1338 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 PLIN1O60240 522 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-206ENST00000483030 GJA5P36382 358 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 IREB2P48200 963 aaKnown RBP9.41□□□□□ -0.9
CSDE1-206ENST00000483030 FOXO4P98177 505 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 CRHR2Q13324 411 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 RASA3Q14644 834 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 OTUD7BQ6GQQ9 843 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 ZNF804AQ7Z570 1209 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 CD99L2Q8TCZ2 262 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 PTPN18Q99952 460 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 PTPN22Q9Y2R2 807 aa9.41□□□□□ -0.9
CSDE1-206ENST00000483030 UNCXA6NJT0 531 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 FKBP1AP62942 108 aaKnown RBP9.4□□□□□ -0.9
CSDE1-206ENST00000483030 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 LMBR1LQ6UX01 489 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 ANKRD13AQ8IZ07 590 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
CSDE1-206ENST00000483030 EFCC1Q9HA90 598 aa9.4□□□□□ -0.9
CSDE1-206ENST00000483030 SSC5DA1L4H1 1573 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 F6X3S4 739 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 VAMP4O75379 141 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 EN2P19622 333 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 CAP1Q01518 475 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 SP3Q02447 781 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 HABP4Q5JVS0 413 aaKnown RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 EPHA10Q5JZY3 1008 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 CNNM1Q9NRU3 951 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 ZNF70Q9UC06 446 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 PSME4Q14997 1843 aa9.39□□□□□ -0.91
CSDE1-206ENST00000483030 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-206ENST00000483030 IL16Q14005 1332 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 SPDYE2Q495Y8 402 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 MFSD14BQ5SR56 506 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 BEND3Q5T5X7 828 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 TDRD7Q8NHU6 1098 aaKnown RBP9.38□□□□□ -0.91
CSDE1-206ENST00000483030 ARMC5Q96C12 935 aa9.38□□□□□ -0.91
CSDE1-206ENST00000483030 OPTNQ96CV9 577 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms