RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SNRPA1P09661 255 aaKnown RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 GYS2P54840 703 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 CASP7P55210 303 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 EXOSC10Q01780 885 aaKnown RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 STX1AQ16623 288 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 CHST3Q7LGC8 479 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 LOC102724159A0A0B4J2E5 919 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 HMGB1P09429 215 aaKnown RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 PWP2Q15269 919 aaKnown RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 TXLNBQ8N3L3 684 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 ADAMTS7Q9UKP4 1686 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 SKILP12757 684 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 DHX40Q8IX18 779 aaKnown RBP14.41□□□□□ -0.1
CCDC78-213ENST00000482878 GPATCH11Q8N954 259 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 ENGASEQ8NFI3 743 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 CTAGE5O15320 804 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 TIMM10P62072 90 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 MRFAP1L1Q96HT8 127 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 LMTK3Q96Q04 1460 aa14.41□□□□□ -0.1
CCDC78-213ENST00000482878 CABP4P57796 275 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 TMCO3Q6UWJ1 677 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 ZNF446Q9NWS9 450 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 SALL1Q9NSC2 1324 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 E7EWF7 191 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 ATG9AQ7Z3C6 839 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 ARGLU1Q9NWB6 273 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-213ENST00000482878 CWC15Q9P013 229 aaKnown RBP14.4□□□□□ -0.1
CCDC78-213ENST00000482878 CAMTA1Q9Y6Y1 1673 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 BECN2A8MW95 431 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
CCDC78-213ENST00000482878 ME1P48163 572 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 ARHGAP29Q52LW3 1261 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 GOLGA6L1Q8N7Z2 621 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 DSCC1Q9BVC3 393 aa14.4□□□□□ -0.1
CCDC78-213ENST00000482878 HSPD1P10809 573 aaKnown RBP14.39□□□□□ -0.11
CCDC78-213ENST00000482878 PDIA3P30101 505 aaKnown RBP14.39□□□□□ -0.11
CCDC78-213ENST00000482878 FAM193AP78312 1265 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 FOXO4P98177 505 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 FSIP1Q8NA03 581 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 HELLSQ9NRZ9 838 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 MYO1CO00159 1063 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 ZMYM1Q5SVZ6 1142 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 PALLDQ8WX93 1383 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
CCDC78-213ENST00000482878 CLCN6P51797 869 aa14.39□□□□□ -0.11
CCDC78-213ENST00000482878 ZNF396Q96N95 335 aaPredicted RBP14.39□□□□□ -0.11
CCDC78-213ENST00000482878 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-213ENST00000482878 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 TTLL5Q6EMB2 1281 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 IFNL2Q8IZJ0 200 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 FMNL2Q96PY5 1086 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 FDPSP14324 419 aaKnown RBP14.38□□□□□ -0.11
CCDC78-213ENST00000482878 ZBTB3Q9H5J0 574 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-213ENST00000482878 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 MAST3O60307 1309 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 CYP27B1O15528 508 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 PCDHA7Q9UN72 937 aa14.38□□□□□ -0.11
CCDC78-213ENST00000482878 MEGF6O75095 1541 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 CCDC69A6NI79 296 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 ST5P78524 1137 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 CCZ1BP86790 482 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 CCZ1P86791 482 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-213ENST00000482878 CASQ1P31415 396 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 ATL3Q6DD88 541 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 UBXN4Q92575 508 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
CCDC78-213ENST00000482878 A0A1B0GVL5 298 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 LMAN1P49257 510 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 FMR1NBQ8N0W7 255 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-213ENST00000482878 MNS1Q8NEH6 495 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 SMARCE1Q969G3 411 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-213ENST00000482878 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
CCDC78-213ENST00000482878 H7C1W4 665 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 M0R2C6 588 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 NEMFO60524 1076 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-213ENST00000482878 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 CCDC34Q96HJ3 373 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 DCAF5Q96JK2 942 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 DRC1Q96MC2 740 aa14.36□□□□□ -0.11
CCDC78-213ENST00000482878 PLA2G4AP47712 749 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 MRPS27Q92552 414 aaKnown RBP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms