RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.36
RPGR-208ENST00000482855 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.36
RPGR-208ENST00000482855 FLT4P35916 1363 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 IVLP07476 585 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
RPGR-208ENST00000482855 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.37
RPGR-208ENST00000482855 PCDHA7Q9UN72 937 aa12.77□□□□□ -0.37
RPGR-208ENST00000482855 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
RPGR-208ENST00000482855 BIN1O00499 593 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 TAF5LO75529 589 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 NLRP12P59046 1061 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 ICE2Q659A1 982 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
RPGR-208ENST00000482855 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 SIL1Q9H173 461 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 ACEP12821 1306 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 PFKFB2O60825 505 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 NDUFA8P51970 172 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 NCAPHQ15003 741 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
RPGR-208ENST00000482855 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
RPGR-208ENST00000482855 EAF2Q96CJ1 260 aaPredicted RBP12.76□□□□□ -0.37
RPGR-208ENST00000482855 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
RPGR-208ENST00000482855 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 CBFA2T2O43439 604 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
RPGR-208ENST00000482855 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
RPGR-208ENST00000482855 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
RPGR-208ENST00000482855 GOLGA1Q92805 767 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 A0A1B0GUL7 405 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 GOLGA6L9A6NEM1 432 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 H3BQF6 201 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 GNG11P61952 73 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 LRRC2Q9BYS8 371 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 LRP6O75581 1613 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 COL14A1Q05707 1796 aaKnown RBP12.75□□□□□ -0.37
RPGR-208ENST00000482855 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 ARHGAP6O43182 974 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 AMPHP49418 695 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 UBASH3AP57075 661 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
RPGR-208ENST00000482855 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
RPGR-208ENST00000482855 RGS22Q8NE09 1264 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 PPP2R2CQ9Y2T4 447 aa12.75□□□□□ -0.37
RPGR-208ENST00000482855 IKBKBO14920 756 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 SERPINC1P01008 464 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 GEMIN8Q9NWZ8 242 aaKnown RBP12.74□□□□□ -0.37
RPGR-208ENST00000482855 USP6P35125 1406 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
RPGR-208ENST00000482855 ATP1A3P13637 1013 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 BRD3Q15059 726 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 STK38Q15208 465 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
RPGR-208ENST00000482855 RTEL1Q9NZ71 1219 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 VPS18Q9P253 973 aa12.74□□□□□ -0.37
RPGR-208ENST00000482855 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
RPGR-208ENST00000482855 SASH1O94885 1247 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 CTDNEP1O95476 244 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 TXLNAP40222 546 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
RPGR-208ENST00000482855 WDR24Q96S15 920 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 MAP2K7O14733 419 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
RPGR-208ENST00000482855 MAGEA9P43362 315 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 NEDD4P46934 1319 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 PLEKHG3A1L390 1219 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 CYP21A2P08686 494 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 CCT2P78371 535 aaKnown RBP12.72□□□□□ -0.37
RPGR-208ENST00000482855 GOLGA8FQ08AF8 430 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 GOLGA8DPQ0D2H9 430 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 APOBRQ0VD83 1088 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 DPF2Q92785 391 aa12.72□□□□□ -0.37
RPGR-208ENST00000482855 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms