RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TXNRD3Q86VQ6 643 aa12.43□□□□□ -0.42
SPTLC1-206ENST00000482632 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-206ENST00000482632 POTECB2RU33 542 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 EYA2O00167 538 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 SLC34A2O95436 690 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 EPS15P42566 896 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
SPTLC1-206ENST00000482632 SCNN1DP51172 638 aa12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 MVPQ14764 893 aaKnown RBP12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
SPTLC1-206ENST00000482632 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 H7C1D1 291 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 SLC5A1P13866 664 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 GYG1P46976 350 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 GPRC5DQ9NZD1 345 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 DDX19BQ9UMR2 479 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
SPTLC1-206ENST00000482632 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 PDE8BO95263 885 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 IL15P40933 162 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 GTF2IP78347 998 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 PUM3Q15397 648 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 CAVIN4Q5BKX8 364 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 CD209Q9NNX6 404 aa12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 IQSEC3Q9UPP2 1182 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-206ENST00000482632 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 CIAO1O76071 339 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 RPS12P25398 132 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 CHAF1AQ13111 956 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 ATP2B3Q16720 1220 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 LDHDQ86WU2 507 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-206ENST00000482632 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 MTX1Q13505 466 aa12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 ARAP2Q8WZ64 1704 aa12.37□□□□□ -0.43
SPTLC1-206ENST00000482632 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 BCAMP50895 628 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 TFCP2Q12800 502 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 FSTL1Q12841 308 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 STRIP1Q5VSL9 837 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 C15orf52Q6ZUT6 534 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 LPIN2Q92539 896 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 DPF2Q92785 391 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
SPTLC1-206ENST00000482632 APBB1O00213 710 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 GORABQ5T7V8 394 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
SPTLC1-206ENST00000482632 FAM84BQ96KN1 310 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms