RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 SNAP47Q5SQN1 464 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 CHPFQ8IZ52 775 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 FAM13BQ9NYF5 915 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 MAP3K20Q9NYL2 800 aaKnown RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 INTUQ9ULD6 942 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 BCAMP50895 628 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 LMNB2Q03252 620 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 KSR2Q6VAB6 950 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.39□□□□□ -0.91
RBM39-233ENST00000482563 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 CASS4Q9NQ75 786 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
RBM39-233ENST00000482563 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 NRDCO43847 1150 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 CD53P19397 219 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
RBM39-233ENST00000482563 ZRSR2Q15696 482 aaKnown RBP9.38□□□□□ -0.91
RBM39-233ENST00000482563 PERM1Q5SV97 790 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 MRM1Q6IN84 353 aaKnown RBP9.38□□□□□ -0.91
RBM39-233ENST00000482563 PDE12Q6L8Q7 609 aaKnown RBP9.38□□□□□ -0.91
RBM39-233ENST00000482563 AMOTL1Q8IY63 956 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 C7orf43Q8WVR3 580 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 CNKSR1Q969H4 720 aa9.38□□□□□ -0.91
RBM39-233ENST00000482563 SOWAHBA6NEL2 793 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 CELA3AP09093 270 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 TFE3P19532 575 aaPredicted RBP9.37□□□□□ -0.91
RBM39-233ENST00000482563 TXLNAP40222 546 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 NEK2P51955 445 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 POU5F1BQ06416 359 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 STRA8Q7Z7C7 330 aa9.37□□□□□ -0.91
RBM39-233ENST00000482563 FHDC1Q9C0D6 1143 aaPredicted RBP9.37□□□□□ -0.91
RBM39-233ENST00000482563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
RBM39-233ENST00000482563 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
RBM39-233ENST00000482563 RLBP1P12271 317 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 SOX5P35711 763 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 FCGRTP55899 365 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.911e-7■■■□□ 18.8
RBM39-233ENST00000482563 CT47A1Q5JQC4 288 aaPredicted RBP9.36□□□□□ -0.91
RBM39-233ENST00000482563 SV2BQ7L1I2 683 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 C1orf127Q8N9H9 656 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 CDH19Q9H159 772 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
RBM39-233ENST00000482563 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 EYA4O95677 639 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 TMEM67Q5HYA8 995 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 ZSWIM2Q8NEG5 633 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 LRRC3Q9BY71 257 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 PTPRHQ9HD43 1115 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 PPM1HQ9ULR3 514 aa9.36□□□□□ -0.91
RBM39-233ENST00000482563 GRM5P41594 1212 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 CASP7P55210 303 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 FBXW10Q5XX13 1052 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 LSRQ86X29 649 aaPredicted RBP9.35□□□□□ -0.91
RBM39-233ENST00000482563 ST13P5Q8NFI4 369 aaPredicted RBP9.35□□□□□ -0.91
RBM39-233ENST00000482563 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 TAGLN3Q9UI15 199 aa9.35□□□□□ -0.91
RBM39-233ENST00000482563 CFAP69A5D8W1 941 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 ADCY3O60266 1144 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 FSHRP23945 695 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
RBM39-233ENST00000482563 VEGFBP49765 207 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 MTMR1Q13613 665 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 INO80DQ53TQ3 878 aaPredicted RBP9.34□□□□□ -0.91
RBM39-233ENST00000482563 SLC4A10Q6U841 1118 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 PCGF5Q86SE9 256 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 PPM1EQ8WY54 764 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 FERD3LQ96RJ6 166 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 NAP1L4Q99733 375 aaKnown RBP9.34□□□□□ -0.91
RBM39-233ENST00000482563 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
RBM39-233ENST00000482563 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
RBM39-233ENST00000482563 A0A1W2PP55 124 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 DDAH1O94760 285 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 WDR78Q5VTH9 848 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.92
RBM39-233ENST00000482563 BNC2Q6ZN30 1099 aaPredicted RBP9.34□□□□□ -0.92
RBM39-233ENST00000482563 LHFPL2Q6ZUX7 228 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 E2F7Q96AV8 911 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 ZNRF3Q9ULT6 936 aa9.34□□□□□ -0.92
RBM39-233ENST00000482563 NOB1Q9ULX3 412 aaKnown RBP9.34□□□□□ -0.92
RBM39-233ENST00000482563 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 F13A1P00488 732 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 IDH3AP50213 366 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 PIN1Q13526 163 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms