RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 DOCK2Q92608 1830 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 GTF2IP78347 998 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 MXD3Q9BW11 206 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
HDAC1-208ENST00000482310 ZNRF3Q9ULT6 936 aa16.2■□□□□ 0.18
HDAC1-208ENST00000482310 EIF6P56537 245 aaKnown RBP16.19■□□□□ 0.18
HDAC1-208ENST00000482310 SCARF1Q14162 830 aa16.19■□□□□ 0.18
HDAC1-208ENST00000482310 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 PSMD14O00487 310 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 IL1R1P14778 569 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 PDE4AP27815 886 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 MCAMP43121 646 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 RASGRF1Q13972 1273 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
HDAC1-208ENST00000482310 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
HDAC1-208ENST00000482310 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
HDAC1-208ENST00000482310 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
HDAC1-208ENST00000482310 MX1P20591 662 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
HDAC1-208ENST00000482310 CXCL9Q07325 125 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 TTLL5Q6EMB2 1281 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 PODNQ7Z5L7 613 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
HDAC1-208ENST00000482310 USP17L3A6NCW0 530 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 USP17L4A6NCW7 530 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 F8W031 263 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-208ENST00000482310 FZD9O00144 591 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 RGS3P49796 1198 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 USP17L1Q7RTZ2 530 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 ECHDC1Q9NTX5 307 aa16.16■□□□□ 0.18
HDAC1-208ENST00000482310 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-208ENST00000482310 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
HDAC1-208ENST00000482310 ZAP70P43403 619 aa16.15■□□□□ 0.18
HDAC1-208ENST00000482310 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
HDAC1-208ENST00000482310 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
HDAC1-208ENST00000482310 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
HDAC1-208ENST00000482310 DENND2AQ9ULE3 1009 aa16.15■□□□□ 0.18
HDAC1-208ENST00000482310 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
HDAC1-208ENST00000482310 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
HDAC1-208ENST00000482310 DNAJC5GQ8N7S2 189 aa16.14■□□□□ 0.17
HDAC1-208ENST00000482310 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
HDAC1-208ENST00000482310 ABCF2Q9UG63 623 aa16.14■□□□□ 0.17
HDAC1-208ENST00000482310 SALL3Q9BXA9 1300 aa16.14■□□□□ 0.17
HDAC1-208ENST00000482310 ECM29Q5VYK3 1845 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 GOLIM4O00461 696 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 PDE1AP54750 535 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 TNIP1Q15025 636 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 DACT2Q5SW24 774 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
HDAC1-208ENST00000482310 SCN4AP35499 1836 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 SEMA3EO15041 775 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 ATP5JP18859 108 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 GMPSP49915 693 aaPredicted RBP16.12■□□□□ 0.17
HDAC1-208ENST00000482310 GRIK5Q16478 980 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 STRIP1Q5VSL9 837 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 RSBN1LQ6PCB5 846 aaPredicted RBP16.12■□□□□ 0.17
HDAC1-208ENST00000482310 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 TTC41PQ6P2S7 1318 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
HDAC1-208ENST00000482310 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
HDAC1-208ENST00000482310 WDR90Q96KV7 1748 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 ERC2O15083 957 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
HDAC1-208ENST00000482310 SCNN1DP51172 638 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 GPC2Q8N158 579 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
HDAC1-208ENST00000482310 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
HDAC1-208ENST00000482310 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
HDAC1-208ENST00000482310 VIL1P09327 827 aaKnown RBP16.1■□□□□ 0.17
HDAC1-208ENST00000482310 PRDX5P30044 214 aa16.1■□□□□ 0.17
HDAC1-208ENST00000482310 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
HDAC1-208ENST00000482310 HAUS7Q99871 368 aa16.1■□□□□ 0.17
HDAC1-208ENST00000482310 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
HDAC1-208ENST00000482310 PAG1Q9NWQ8 432 aa16.1■□□□□ 0.17
HDAC1-208ENST00000482310 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
HDAC1-208ENST00000482310 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
HDAC1-208ENST00000482310 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
HDAC1-208ENST00000482310 TOMM70O94826 608 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 HTRA3P83110 453 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
HDAC1-208ENST00000482310 TBC1D22AQ8WUA7 517 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
HDAC1-208ENST00000482310 TTF2Q9UNY4 1162 aaKnown RBP16.09■□□□□ 0.17
HDAC1-208ENST00000482310 LDHBP07195 334 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms