RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 PI16Q6UXB8 463 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
GGPS1-205ENST00000482013 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
GGPS1-205ENST00000482013 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 M0R2C6 588 aa13.95□□□□□ -0.18
GGPS1-205ENST00000482013 PDE6AP16499 860 aa13.95□□□□□ -0.18
GGPS1-205ENST00000482013 RAB3GAP1Q15042 981 aa13.95□□□□□ -0.18
GGPS1-205ENST00000482013 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
GGPS1-205ENST00000482013 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-205ENST00000482013 MYH13Q9UKX3 1938 aa13.95□□□□□ -0.18
GGPS1-205ENST00000482013 TCRBV5S4A2TA0A5A2 114 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 IDH1O75874 414 aaKnown RBP13.94□□□□□ -0.18
GGPS1-205ENST00000482013 CYP21A2P08686 494 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 AK2P54819 239 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 DDR1Q08345 913 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 ALX1Q15699 326 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 VPS37DQ86XT2 251 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 FAM84BQ96KN1 310 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-205ENST00000482013 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
GGPS1-205ENST00000482013 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 XDHP47989 1333 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 SNAP23O00161 211 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 GPAA1O43292 621 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 CHGBP05060 677 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
GGPS1-205ENST00000482013 GNAT2P19087 354 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 HIBADHP31937 336 aaKnown RBP13.93□□□□□ -0.18
GGPS1-205ENST00000482013 NBR1Q14596 966 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 IMMTQ16891 758 aaKnown RBP13.93□□□□□ -0.18
GGPS1-205ENST00000482013 CLEC17AQ6ZS10 378 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 CCDC24Q8N4L8 307 aa13.93□□□□□ -0.18
GGPS1-205ENST00000482013 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
GGPS1-205ENST00000482013 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 PTMSP20962 102 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 GYG1P46976 350 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 SLFNL1Q499Z3 407 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
GGPS1-205ENST00000482013 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-205ENST00000482013 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 IRS2Q9Y4H2 1338 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
GGPS1-205ENST00000482013 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
GGPS1-205ENST00000482013 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 AIDAQ96BJ3 306 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 CHMP4CQ96CF2 233 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 GBP4Q96PP9 640 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 STRBPQ96SI9 672 aaKnown RBP13.91□□□□□ -0.18
GGPS1-205ENST00000482013 PODXL2Q9NZ53 605 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
GGPS1-205ENST00000482013 LRRC37AA6NMS7 1700 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-205ENST00000482013 FGAP02671 866 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 PDE6BP35913 854 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-205ENST00000482013 ZGPATQ8N5A5 531 aaKnown RBP13.9□□□□□ -0.18
GGPS1-205ENST00000482013 MAGEB6Q8N7X4 407 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 STK32BQ9NY57 414 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 CCDC88AQ3V6T2 1871 aa13.9□□□□□ -0.18
GGPS1-205ENST00000482013 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
GGPS1-205ENST00000482013 DUOX1Q9NRD9 1551 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 E7EWF7 191 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 FOXP2O15409 715 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 CPA1P15085 419 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 NPR1P16066 1061 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 MCM4P33991 863 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 EXOSC10Q01780 885 aaKnown RBP13.89□□□□□ -0.19
GGPS1-205ENST00000482013 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 SALL1Q9NSC2 1324 aa13.89□□□□□ -0.19
GGPS1-205ENST00000482013 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 ZNF213O14771 459 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-205ENST00000482013 ZNF804AQ7Z570 1209 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
GGPS1-205ENST00000482013 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 TNPO1Q92973 898 aaKnown RBP13.88□□□□□ -0.19
GGPS1-205ENST00000482013 TAF6LQ9Y6J9 622 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
GGPS1-205ENST00000482013 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 CYP7A1P22680 504 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 BAG6P46379 1132 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
GGPS1-205ENST00000482013 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
GGPS1-205ENST00000482013 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms