RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 HDAC5Q9UQL6 1122 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 CIAO1O76071 339 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 PDE8BO95263 885 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-210ENST00000481508 FGFR2P21802 821 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 GRM1Q13255 1194 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
SSBP1-210ENST00000481508 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-210ENST00000481508 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
SSBP1-210ENST00000481508 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
SSBP1-210ENST00000481508 EPS15P42566 896 aa13.16□□□□□ -0.3
SSBP1-210ENST00000481508 GYG1P46976 350 aa13.16□□□□□ -0.3
SSBP1-210ENST00000481508 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-210ENST00000481508 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-210ENST00000481508 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
SSBP1-210ENST00000481508 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
SSBP1-210ENST00000481508 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-210ENST00000481508 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
SSBP1-210ENST00000481508 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
SSBP1-210ENST00000481508 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-210ENST00000481508 CRBNQ96SW2 442 aa13.15□□□□□ -0.3
SSBP1-210ENST00000481508 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
SSBP1-210ENST00000481508 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-210ENST00000481508 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
SSBP1-210ENST00000481508 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-210ENST00000481508 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 G3V3G9 751 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 SASH1O94885 1247 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 VIL1P09327 827 aaKnown RBP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 ADORA1P30542 326 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 IL15P40933 162 aaPredicted RBP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 TFCP2Q12800 502 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
SSBP1-210ENST00000481508 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
SSBP1-210ENST00000481508 ZNF609O15014 1411 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 EGFRP00533 1210 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 IL1R1P14778 569 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 SOX10P56693 466 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 TNIP1Q15025 636 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 ATP2B3Q16720 1220 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-210ENST00000481508 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
SSBP1-210ENST00000481508 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
SSBP1-210ENST00000481508 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-210ENST00000481508 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
SSBP1-210ENST00000481508 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 EPHX2P34913 555 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-210ENST00000481508 BCAMP50895 628 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 GTF2IP78347 998 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-210ENST00000481508 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 RSBN1LQ6PCB5 846 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-210ENST00000481508 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
SSBP1-210ENST00000481508 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 GMLQ99445 158 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
SSBP1-210ENST00000481508 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
SSBP1-210ENST00000481508 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
SSBP1-210ENST00000481508 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
SSBP1-210ENST00000481508 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
SSBP1-210ENST00000481508 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-210ENST00000481508 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
SSBP1-210ENST00000481508 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
SSBP1-210ENST00000481508 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
SSBP1-210ENST00000481508 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 AOC2O75106 756 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
SSBP1-210ENST00000481508 SLC5A1P13866 664 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-210ENST00000481508 PHKA1P46020 1223 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 TIMM10P62072 90 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 G3BP1Q13283 466 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSBP1-210ENST00000481508 GRIK5Q16478 980 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 LPIN2Q92539 896 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 CAPNS2Q96L46 248 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
SSBP1-210ENST00000481508 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
SSBP1-210ENST00000481508 DGKZQ13574 1117 aa13.09□□□□□ -0.31
SSBP1-210ENST00000481508 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms