RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
PDCD4-206ENST00000481353 KHNYNO15037 678 aaKnown RBP11.53□□□□□ -0.56
PDCD4-206ENST00000481353 OIP5O43482 229 aa11.53□□□□□ -0.56
PDCD4-206ENST00000481353 MAP3K6O95382 1288 aa11.53□□□□□ -0.56
PDCD4-206ENST00000481353 SNRPNP63162 240 aaKnown RBP11.53□□□□□ -0.56
PDCD4-206ENST00000481353 RASSF7Q02833 373 aa11.53□□□□□ -0.56
PDCD4-206ENST00000481353 CCNJLQ8IV13 435 aa11.53□□□□□ -0.56
PDCD4-206ENST00000481353 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDCD4-206ENST00000481353 SPON2Q9BUD6 331 aa11.53□□□□□ -0.56
PDCD4-206ENST00000481353 PSAPP07602 524 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 BMP4P12644 408 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-206ENST00000481353 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 SV2BQ7L1I2 683 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 RELL1Q8IUW5 271 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
PDCD4-206ENST00000481353 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-206ENST00000481353 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 HYAL2Q12891 473 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 CCDC144BQ3MJ40 725 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 NCAPG2Q86XI2 1143 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 TMEM74Q96NL1 305 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 ADAMTS1Q9UHI8 967 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
PDCD4-206ENST00000481353 STK10O94804 968 aaKnown RBP11.5□□□□□ -0.57
PDCD4-206ENST00000481353 NFKB1P19838 968 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 MAP2K3P46734 347 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 PLAURQ03405 335 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 KCNQ5Q9NR82 932 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
PDCD4-206ENST00000481353 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
PDCD4-206ENST00000481353 SPEM2Q0P670 501 aa11.49□□□□□ -0.57
PDCD4-206ENST00000481353 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
PDCD4-206ENST00000481353 CEP120Q8N960 986 aa11.49□□□□□ -0.57
PDCD4-206ENST00000481353 OSMRQ99650 979 aa11.49□□□□□ -0.57
PDCD4-206ENST00000481353 TRIM56Q9BRZ2 755 aaKnown RBP11.49□□□□□ -0.57
PDCD4-206ENST00000481353 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
PDCD4-206ENST00000481353 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
PDCD4-206ENST00000481353 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
PDCD4-206ENST00000481353 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
PDCD4-206ENST00000481353 RHOVQ96L33 236 aa11.48□□□□□ -0.57
PDCD4-206ENST00000481353 CEP44Q9C0F1 390 aa11.48□□□□□ -0.57
PDCD4-206ENST00000481353 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
PDCD4-206ENST00000481353 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 PRXQ9BXM0 1461 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 ITPKAP23677 461 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 FCHSD1Q86WN1 690 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
PDCD4-206ENST00000481353 BHLHE41Q9C0J9 482 aaPredicted RBP11.47□□□□□ -0.57
PDCD4-206ENST00000481353 DHX32Q7L7V1 743 aaKnown RBP11.46□□□□□ -0.57
PDCD4-206ENST00000481353 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
PDCD4-206ENST00000481353 NSFL1CQ9UNZ2 370 aaKnown RBP11.46□□□□□ -0.57
PDCD4-206ENST00000481353 MINDY4BA8MYZ0 360 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 FBXO24O75426 580 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 GDF11O95390 407 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 ACPPP15309 386 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 GRIA4P48058 902 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 NRLP54845 237 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
PDCD4-206ENST00000481353 PHC3Q8NDX5 983 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
PDCD4-206ENST00000481353 EDARADDQ8WWZ3 215 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 SLC30A3Q99726 388 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 NT5C1AQ9BXI3 368 aa11.45□□□□□ -0.58
PDCD4-206ENST00000481353 NFKBIEO00221 500 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 ITGB2P05107 769 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 LIG3P49916 1009 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 RPS26P11Q5JNZ5 115 aaPredicted RBP11.44□□□□□ -0.58
PDCD4-206ENST00000481353 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 NBPF6Q5VWK0 638 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 TPTE2Q6XPS3 522 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 TMEM102Q8N9M5 508 aaPredicted RBP11.44□□□□□ -0.58
PDCD4-206ENST00000481353 BHMTQ93088 406 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
PDCD4-206ENST00000481353 NBPF4Q96M43 638 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
PDCD4-206ENST00000481353 TMA7Q9Y2S6 64 aaKnown RBP11.44□□□□□ -0.58
PDCD4-206ENST00000481353 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 F6X3S4 739 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 GARTP22102 1010 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 COL9A2Q14055 689 aaPredicted RBP11.43□□□□□ -0.58
PDCD4-206ENST00000481353 SLCO4C1Q6ZQN7 724 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 RAB44Q7Z6P3 723 aaPredicted RBP11.43□□□□□ -0.58
PDCD4-206ENST00000481353 STRIP2Q9ULQ0 834 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
PDCD4-206ENST00000481353 TLDC2A0PJX2 215 aa11.42□□□□□ -0.58
PDCD4-206ENST00000481353 GREM1O60565 184 aa11.42□□□□□ -0.58
PDCD4-206ENST00000481353 CELA3AP09093 270 aa11.42□□□□□ -0.58
PDCD4-206ENST00000481353 ARAFP10398 606 aa11.42□□□□□ -0.58
PDCD4-206ENST00000481353 EPXP11678 715 aa11.42□□□□□ -0.58
PDCD4-206ENST00000481353 SOX9P48436 509 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms