RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 GNAI3P08754 354 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 VEGFBP49765 207 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 ITPRIPQ8IWB1 547 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 JMYQ8N9B5 988 aa14.24□□□□□ -0.13
RAPGEF1-207ENST00000481260 POLR2AP24928 1970 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 WNT10BO00744 389 aa14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 ZBTB7BO15156 539 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 GNAI2P04899 355 aa14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 MTX1Q13505 466 aa14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 PUM3Q15397 648 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 CDC37L1Q7L3B6 337 aa14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 ZBED3Q96IU2 234 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 COPRSQ9NQ92 184 aa14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-207ENST00000481260 CIAO1O76071 339 aa14.22□□□□□ -0.13
RAPGEF1-207ENST00000481260 TFCP2Q12800 502 aa14.22□□□□□ -0.13
RAPGEF1-207ENST00000481260 MOB2Q70IA6 237 aa14.22□□□□□ -0.13
RAPGEF1-207ENST00000481260 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
RAPGEF1-207ENST00000481260 FAM205AQ6ZU69 1335 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 TIMM10P62072 90 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 GRM1Q13255 1194 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 MFSD14BQ5SR56 506 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 CDCA5Q96FF9 252 aa14.21□□□□□ -0.13
RAPGEF1-207ENST00000481260 MYO3BQ8WXR4 1341 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 CLRN2A0PK11 232 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 PHKA1P46020 1223 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 ATP2B3Q16720 1220 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 CFAP100Q494V2 611 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 ZIC5Q96T25 663 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 FZD1Q9UP38 647 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 TLL2Q9Y6L7 1015 aa14.2□□□□□ -0.14
RAPGEF1-207ENST00000481260 TRPM7Q96QT4 1865 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 AOC2O75106 756 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 SLC5A1P13866 664 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 IL15P40933 162 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 POLA2Q14181 598 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 SAPCD2Q86UD0 394 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 OGFOD1Q8N543 542 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 LPIN2Q92539 896 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
RAPGEF1-207ENST00000481260 CENPBP07199 599 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 IFIT1P09914 478 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 DEFB115Q30KQ5 88 aa14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 SULF1Q8IWU6 871 aa14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 CDAN1Q8IWY9 1227 aa14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-207ENST00000481260 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 HSPA1AP0DMV8 641 aaKnown RBP14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 HSPA1BP0DMV9 641 aaKnown RBP14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 FKBP1AP62942 108 aaKnown RBP14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 DLGAP5Q15398 846 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 CAVIN4Q5BKX8 364 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 CEP85Q6P2H3 762 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
RAPGEF1-207ENST00000481260 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 A0A1B0GUL7 405 aa14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 FRAT2O75474 233 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
RAPGEF1-207ENST00000481260 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 SSC5DA1L4H1 1573 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 CRKP46108 304 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 RBM5P52756 815 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 CACNB3P54284 484 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 HUNKP57058 714 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 PRKG1Q13976 671 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 MTMR14Q8NCE2 650 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 TDRD3Q9H7E2 651 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 GBA2Q9HCG7 927 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
RAPGEF1-207ENST00000481260 UBE2Q2LH0YL09 131 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 PRDX5P30044 214 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 RASGRF1Q13972 1273 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 DIXDC1Q155Q3 683 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 VEZTQ9HBM0 779 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 TLR7Q9NYK1 1049 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 ARAP2Q8WZ64 1704 aa14.14□□□□□ -0.15
RAPGEF1-207ENST00000481260 FAM155AB1AL88 458 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms