RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 APAF1O14727 1248 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 DEFB123Q8N688 67 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 MYD88Q99836 296 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
SMARCE1-210ENST00000481231 VCANP13611 3396 aa12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 USP2O75604 605 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 IREB2P48200 963 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 ANKRD18AQ8IVF6 992 aa12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 FAM43AQ8N2R8 423 aa12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-210ENST00000481231 AOX1Q06278 1338 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 KLRK1P26718 216 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 GNAI1P63096 354 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 CCL15Q16663 113 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 ANKRD13AQ8IZ07 590 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 CWC25Q9NXE8 425 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-210ENST00000481231 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 PDE8AO60658 829 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 GJA8P48165 433 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 VEZTQ9HBM0 779 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 PPP2R3BQ9Y5P8 575 aa12.14□□□□□ -0.47
SMARCE1-210ENST00000481231 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 FARP2O94887 1054 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 CCL5P13501 91 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 CTGFP29279 349 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 GTF2IP78347 998 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 KIF22Q14807 665 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-210ENST00000481231 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 EVI5O60447 810 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 TLR2O60603 784 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 GJB1P08034 283 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 MINPP1Q9UNW1 487 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
SMARCE1-210ENST00000481231 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 GRK4P32298 578 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 MMP14P50281 582 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 GTF2A2P52657 109 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 CTSWP56202 376 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 VGLL4Q14135 290 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 RASA3Q14644 834 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 U2AF1L4Q8WU68 220 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
SMARCE1-210ENST00000481231 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 PRMT6Q96LA8 375 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 BIN2Q9UBW5 565 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 SRRDQ9UH36 339 aa12.1□□□□□ -0.47
SMARCE1-210ENST00000481231 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 BTBD19C9JJ37 291 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 MYO1BO43795 1136 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 GNRH1P01148 92 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 OSBPP22059 807 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 PRMT2P55345 433 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 GPR153Q6NV75 609 aa12.09□□□□□ -0.47
SMARCE1-210ENST00000481231 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms