RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 TMCO4Q5TGY1 634 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 DHX32Q7L7V1 743 aaKnown RBP10.63□□□□□ -0.71
CBX3-206ENST00000481057 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 DMRTB1Q96MA1 342 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 ASB16Q96NS5 453 aa10.63□□□□□ -0.71
CBX3-206ENST00000481057 TLR7Q9NYK1 1049 aaKnown RBP10.63□□□□□ -0.71
CBX3-206ENST00000481057 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
CBX3-206ENST00000481057 TNFRSF21O75509 655 aa10.62□□□□□ -0.71
CBX3-206ENST00000481057 CELA2BP08218 269 aaPredicted RBP10.62□□□□□ -0.71
CBX3-206ENST00000481057 HOXD8P13378 290 aaPredicted RBP10.62□□□□□ -0.71
CBX3-206ENST00000481057 SOX18P35713 384 aa10.62□□□□□ -0.71
CBX3-206ENST00000481057 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
CBX3-206ENST00000481057 C1orf229Q6ZS94 237 aaPredicted RBP10.62□□□□□ -0.71
CBX3-206ENST00000481057 OR13H1Q8NG92 308 aa10.62□□□□□ -0.71
CBX3-206ENST00000481057 UBE2OQ9C0C9 1292 aaKnown RBP10.62□□□□□ -0.71
CBX3-206ENST00000481057 OIP5O43482 229 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 BCRP11274 1271 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 EPXP11678 715 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 TTC39BQ5VTQ0 682 aaPredicted RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 SNX29Q8TEQ0 813 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 ALKBH8Q96BT7 664 aaKnown RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 LRRC4BQ9NT99 713 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 DNAJB12Q9NXW2 375 aaKnown RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 FOXD3Q9UJU5 478 aaPredicted RBP10.61□□□□□ -0.71
CBX3-206ENST00000481057 UTRNP46939 3433 aa10.61□□□□□ -0.71
CBX3-206ENST00000481057 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
CBX3-206ENST00000481057 ELOA3DA6NLF2 546 aaPredicted RBP10.6□□□□□ -0.71
CBX3-206ENST00000481057 PSAPP07602 524 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
CBX3-206ENST00000481057 ADH7P40394 386 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 NRLP54845 237 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 GPLD1P80108 840 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 TBC1D8BQ0IIM8 1120 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 ELOA3BQ3SY89 546 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 ELOA3Q8NG57 546 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 CNTN3Q9P232 1028 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 TNRQ92752 1358 aa10.6□□□□□ -0.71
CBX3-206ENST00000481057 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 PLAURQ03405 335 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 R3HDM1Q15032 1099 aaKnown RBP10.59□□□□□ -0.71
CBX3-206ENST00000481057 DNAJC14Q6Y2X3 702 aaPredicted RBP10.59□□□□□ -0.71
CBX3-206ENST00000481057 C1orf127Q8N9H9 656 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 TRPM4Q8TD43 1214 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 EDARADDQ8WWZ3 215 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
CBX3-206ENST00000481057 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 TREHO43280 583 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 PHACTR2O75167 634 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
CBX3-206ENST00000481057 SVOPQ8N4V2 548 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 NIF3L1Q9GZT8 377 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 SLC6A14Q9UN76 642 aa10.58□□□□□ -0.72
CBX3-206ENST00000481057 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
CBX3-206ENST00000481057 UGGT1Q9NYU2 1555 aa10.57□□□□□ -0.72
CBX3-206ENST00000481057 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
CBX3-206ENST00000481057 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
CBX3-206ENST00000481057 DSC3Q14574 896 aa10.57□□□□□ -0.72
CBX3-206ENST00000481057 PCSK7Q16549 785 aa10.57□□□□□ -0.72
CBX3-206ENST00000481057 MAP3K1Q13233 1512 aa10.57□□□□□ -0.72
CBX3-206ENST00000481057 NUP153P49790 1475 aaKnown RBP10.56□□□□□ -0.72
CBX3-206ENST00000481057 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
CBX3-206ENST00000481057 ORC1Q13415 861 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 GGT6Q6P531 493 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
CBX3-206ENST00000481057 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 TRPC5Q9UL62 973 aaPredicted RBP10.56□□□□□ -0.72
CBX3-206ENST00000481057 ATP7AQ04656 1500 aa10.56□□□□□ -0.72
CBX3-206ENST00000481057 NEFLP07196 543 aa10.55□□□□□ -0.72
CBX3-206ENST00000481057 CES1P23141 567 aa10.55□□□□□ -0.72
CBX3-206ENST00000481057 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
CBX3-206ENST00000481057 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
CBX3-206ENST00000481057 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.72
CBX3-206ENST00000481057 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
CBX3-206ENST00000481057 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
CBX3-206ENST00000481057 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
CBX3-206ENST00000481057 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
CBX3-206ENST00000481057 MSH6P52701 1360 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 ANKRD33BA6NCL7 494 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 EREGO14944 169 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 KIF4AO95239 1232 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 ALAS2P22557 587 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 HYAL2Q12891 473 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 PMEPA1Q969W9 287 aa10.54□□□□□ -0.72
CBX3-206ENST00000481057 CHSY3Q70JA7 882 aa10.53□□□□□ -0.72
CBX3-206ENST00000481057 USP21Q9UK80 565 aa10.53□□□□□ -0.72
CBX3-206ENST00000481057 AMOTL2Q9Y2J4 779 aa10.53□□□□□ -0.72
CBX3-206ENST00000481057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.53□□□□□ -0.72
CBX3-206ENST00000481057 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
CBX3-206ENST00000481057 KIF14Q15058 1648 aa10.52□□□□□ -0.73
CBX3-206ENST00000481057 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms