RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 IL1RAPL2Q9NP60 686 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 ADARB2Q9NS39 739 aaKnown RBP25.1■■□□□ 1.61
CTSA-206ENST00000480961 CLEC11AQ9Y240 323 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 FPGT-TNNI3KV9GXZ4 949 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 EGFRP00533 1210 aa25.09■■□□□ 1.61
CTSA-206ENST00000480961 GORABQ5T7V8 394 aa25.09■■□□□ 1.61
CTSA-206ENST00000480961 CCDC102BQ68D86 513 aa25.09■■□□□ 1.61
CTSA-206ENST00000480961 KIAA0825Q8IV33 1275 aa25.09■■□□□ 1.61
CTSA-206ENST00000480961 F8W031 263 aaPredicted RBP25.08■■□□□ 1.61
CTSA-206ENST00000480961 USP17L8P0C7I0 530 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 HIRAP54198 1017 aaPredicted RBP25.08■■□□□ 1.61
CTSA-206ENST00000480961 HSP90AB4PQ58FF6 505 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 ERC1Q8IUD2 1116 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 RHPN1Q8TCX5 695 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.61
CTSA-206ENST00000480961 CCDC8Q9H0W5 538 aaPredicted RBP25.08■■□□□ 1.61
CTSA-206ENST00000480961 GPR108Q9NPR9 543 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 ZNF609O15014 1411 aa25.08■■□□□ 1.61
CTSA-206ENST00000480961 FAM205AQ6ZU69 1335 aa25.08■■□□□ 1.6
CTSA-206ENST00000480961 PNMA8AQ86V59 439 aaPredicted RBP25.07■■□□□ 1.6
CTSA-206ENST00000480961 DBNDD2Q9BQY9 259 aa25.07■■□□□ 1.6
CTSA-206ENST00000480961 GNL3LQ9NVN8 582 aaKnown RBP25.07■■□□□ 1.6
CTSA-206ENST00000480961 TLR7Q9NYK1 1049 aaKnown RBP25.07■■□□□ 1.6
CTSA-206ENST00000480961 GRIK5Q16478 980 aa25.06■■□□□ 1.6
CTSA-206ENST00000480961 MFSD14BQ5SR56 506 aa25.06■■□□□ 1.6
CTSA-206ENST00000480961 USP50Q70EL3 339 aaPredicted RBP25.06■■□□□ 1.6
CTSA-206ENST00000480961 RBM46Q8TBY0 533 aaKnown RBP25.06■■□□□ 1.6
CTSA-206ENST00000480961 ZNF280AP59817 542 aaPredicted RBP25.05■■□□□ 1.6
CTSA-206ENST00000480961 MYO3BQ8WXR4 1341 aa25.05■■□□□ 1.6
CTSA-206ENST00000480961 SMARCA5O60264 1052 aaPredicted RBP25.04■■□□□ 1.6
CTSA-206ENST00000480961 RAB11FIP3O75154 756 aa25.04■■□□□ 1.6
CTSA-206ENST00000480961 AACSQ86V21 672 aa25.04■■□□□ 1.6
CTSA-206ENST00000480961 LDHDQ86WU2 507 aa25.04■■□□□ 1.6
CTSA-206ENST00000480961 KIF1BPQ96EK5 621 aa25.04■■□□□ 1.6
CTSA-206ENST00000480961 DCTPP1Q9H773 170 aa25.04■■□□□ 1.6
CTSA-206ENST00000480961 DBNLQ9UJU6 430 aaKnown RBP25.04■■□□□ 1.6
CTSA-206ENST00000480961 C1QTNF8P60827 252 aa25.03■■□□□ 1.6
CTSA-206ENST00000480961 MAP1SQ66K74 1059 aaPredicted RBP25.03■■□□□ 1.6
CTSA-206ENST00000480961 CHADLQ6NUI6 762 aa25.03■■□□□ 1.6
CTSA-206ENST00000480961 MYOZ2Q9NPC6 264 aa25.03■■□□□ 1.6
CTSA-206ENST00000480961 COL1A1P02452 1464 aaPredicted RBP25.02■■□□□ 1.6
CTSA-206ENST00000480961 FKBP1AP62942 108 aaKnown RBP25.02■■□□□ 1.6
CTSA-206ENST00000480961 RASGRF1Q13972 1273 aa25.02■■□□□ 1.6
CTSA-206ENST00000480961 KIF4BQ2VIQ3 1234 aa25.02■■□□□ 1.6
CTSA-206ENST00000480961 OGFOD1Q8N543 542 aa25.02■■□□□ 1.6
CTSA-206ENST00000480961 SMC1BQ8NDV3 1235 aa25.02■■□□□ 1.6
CTSA-206ENST00000480961 SCARF1Q14162 830 aa25.01■■□□□ 1.59
CTSA-206ENST00000480961 PI16Q6UXB8 463 aa25.01■■□□□ 1.59
CTSA-206ENST00000480961 DENND2AQ9ULE3 1009 aa25.01■■□□□ 1.59
CTSA-206ENST00000480961 ASTN2O75129 1339 aaPredicted RBP25.01■■□□□ 1.59
CTSA-206ENST00000480961 SCN4AP35499 1836 aa25■■□□□ 1.59
CTSA-206ENST00000480961 TTC39AQ5SRH9 613 aa25■■□□□ 1.59
CTSA-206ENST00000480961 CLASRPQ8N2M8 674 aaKnown RBP25■■□□□ 1.59
CTSA-206ENST00000480961 TTF2Q9UNY4 1162 aaKnown RBP25■■□□□ 1.59
CTSA-206ENST00000480961 PCDHAC2Q9Y5I4 1007 aa25■■□□□ 1.59
CTSA-206ENST00000480961 SEMA3EO15041 775 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 CCDC158Q5M9N0 1113 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 WDR66Q8TBY9 1149 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 TBC1D22AQ8WUA7 517 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 LRRCC1Q9C099 1032 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 SNRKQ9NRH2 765 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 HMG20BQ9P0W2 317 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 HDAC9Q9UKV0 1011 aa24.99■■□□□ 1.59
CTSA-206ENST00000480961 AAMPQ13685 434 aa24.98■■□□□ 1.59
CTSA-206ENST00000480961 NBPF9Q3BBW0 867 aa24.98■■□□□ 1.59
CTSA-206ENST00000480961 IFIT2P09913 472 aaKnown RBP24.97■■□□□ 1.59
CTSA-206ENST00000480961 ARID4AP29374 1257 aaPredicted RBP24.97■■□□□ 1.59
CTSA-206ENST00000480961 FSTL1Q12841 308 aa24.97■■□□□ 1.59
CTSA-206ENST00000480961 CNTROBQ8N137 903 aa24.97■■□□□ 1.59
CTSA-206ENST00000480961 UQCRFS1P1P0C7P4 283 aa24.96■■□□□ 1.59
CTSA-206ENST00000480961 MCAMP43121 646 aa24.96■■□□□ 1.59
CTSA-206ENST00000480961 RBM5P52756 815 aaKnown RBP eCLIP24.96■■□□□ 1.59
CTSA-206ENST00000480961 HDAC1Q13547 482 aaPredicted RBP24.96■■□□□ 1.59
CTSA-206ENST00000480961 CFAP100Q494V2 611 aa24.96■■□□□ 1.59
CTSA-206ENST00000480961 SPATA5Q8NB90 893 aa24.96■■□□□ 1.59
CTSA-206ENST00000480961 IGHDP01880 384 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 FMR1Q06787 632 aaKnown RBP eCLIP24.95■■□□□ 1.58
CTSA-206ENST00000480961 DLGAP5Q15398 846 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 DLK2Q6UY11 383 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 TBC1D9Q6ZT07 1266 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 ABCF2Q9UG63 623 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 PGAP2Q9UHJ9 254 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 SCAF8Q9UPN6 1271 aaKnown RBP24.95■■□□□ 1.58
CTSA-206ENST00000480961 ZNF646O15015 1829 aaPredicted RBP24.95■■□□□ 1.58
CTSA-206ENST00000480961 PSME4Q14997 1843 aa24.95■■□□□ 1.58
CTSA-206ENST00000480961 WNT10BO00744 389 aa24.94■■□□□ 1.58
CTSA-206ENST00000480961 PRDX5P30044 214 aa24.94■■□□□ 1.58
CTSA-206ENST00000480961 ZC3H15Q8WU90 426 aaKnown RBP24.94■■□□□ 1.58
CTSA-206ENST00000480961 GLIS2Q9BZE0 524 aaPredicted RBP24.94■■□□□ 1.58
CTSA-206ENST00000480961 GGA3Q9NZ52 723 aa24.94■■□□□ 1.58
CTSA-206ENST00000480961 NDUFB9Q9Y6M9 179 aa24.94■■□□□ 1.58
CTSA-206ENST00000480961 AOX1Q06278 1338 aa24.93■■□□□ 1.58
CTSA-206ENST00000480961 ARAP2Q8WZ64 1704 aa24.93■■□□□ 1.58
CTSA-206ENST00000480961 TRAF5O00463 557 aa24.93■■□□□ 1.58
CTSA-206ENST00000480961 ITGBL1O95965 494 aaPredicted RBP24.93■■□□□ 1.58
CTSA-206ENST00000480961 ANGEL2Q5VTE6 544 aaKnown RBP24.93■■□□□ 1.58
CTSA-206ENST00000480961 USP48Q86UV5 1035 aa24.93■■□□□ 1.58
CTSA-206ENST00000480961 RWDD1Q9H446 243 aaPredicted RBP24.93■■□□□ 1.58
CTSA-206ENST00000480961 LDHBP07195 334 aaKnown RBP24.92■■□□□ 1.58
CTSA-206ENST00000480961 CRKP46108 304 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms